Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq24293 491 1e-134 seq32758 161 3e-35 seq27014 138 3e-28 seq5280 131 5e-26 seq28567 111 5e-20 seq1151 109 2e-19 seq32305 96.9 1e-15 >seq24293 Length=256785 Score = 491 bits (544), Expect = 1e-134 Identities = 703/985 (71%), Gaps = 4/985 (0%) Strand=Plus/Plus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| || || || ||||||||||||||||| || ||||||||||| | || |||||| Sbjct 205434 GCTAGATCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 205493 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAAC-ATCTACTACTGA 25995 || ||||| | | ||||||||| ||| |||| | || || | ||| |||||||| Sbjct 205494 GCACGGTTAATAATATCAGCCCAAGTATTAATTA-CACGCCCTTGGCTATCAACTACTGA 205552 Query 25996 CTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAG 26055 ||||| || || |||||||||||||| || ||||| |||| ||||| | || || | Sbjct 205553 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTAAA 205612 Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115 ||| || || || || ||||||| ||| || || || || | ||||| ||| || || Sbjct 205613 CCAGATACCCACTACAGGCCAAGCAGCTAGGAAAAAGTGTAATGAACGAGAGTTGTTGAA 205672 Query 26116 ACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGT 26175 ||| ||||| || || || |||| ||||| || || || || || || |||||||| || Sbjct 205673 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGT 205732 Query 26176 CTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGC 26235 ||||| ||||| || || | || || | ||| || | | ||||| ||||| Sbjct 205733 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCT 205792 Query 26236 AATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAAC 26295 || | ||||| ||||| || ||||||||| ||| || | || ||||| || Sbjct 205793 GATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATAC 205852 Query 26296 CCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATAC 26355 ||||| ||||| ||| || ||||||||||| || || || || || || |||||||| Sbjct 205853 ACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATAC 205912 Query 26356 GAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTG 26415 | |||||| || ||||||||||| || || |||||||| |||||| |||||| ||||| Sbjct 205913 AATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTG 205972 Query 26416 TCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAAC 26475 || | || |||| ||||| |||||| ||| |||| | || |||| ||||||||| Sbjct 205973 ACCTATTGGGTAAATCAAGAAAACTGCGGTAGCAGCGGCAACAGGAGCTGAATATGCAAC 206032 Query 26476 AAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGC 26535 | ||||| |||| ||| || || | | || |||||||||| | || || Sbjct 206033 AGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACA 206092 Query 26536 TGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCA 26595 ||||| || | ||||||||| | | || | || ||| || ||||| ||||||| ||| Sbjct 206093 AGCTACACCAAGTAAGAAGTGTAGAACTATTAATTCATAAGGACCGCCGTTGTATAACCA 206152 Query 26596 CTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGA 26655 || || | | | ||||||||||| |||||||| || | || || || ||| | Sbjct 206153 TTCATCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCAATAGCTGCAGAAGT 206212 Query 26656 GGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTC 26715 || | | || ||||| || |||||||||||||| | || || || ||||| || || Sbjct 206213 AGGAATAATGGCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTC 206272 Query 26716 ACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTAG 26774 ||| || ||||| |||||||| || || || || |||||||||| ||||| ||| | || Sbjct 206273 ACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACA-GAAG 206331 Query 26775 TGGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCT 26834 | || | | |||| || ||||| | || || |||||||| | || ||||| || | Sbjct 206332 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTT 206391 Query 26835 CAGTACTTGTAACCCACTCACAAAA 26859 | || || || | ||| | ||| || Sbjct 206392 CGGTGCTGGTTATCCAGTTACAGAA 206416 >seq32758 Length=53022 Score = 161 bits (178), Expect = 3e-35 Identities = 216/299 (72%), Gaps = 1/299 (0%) Strand=Plus/Plus Query 26288 CCGAAAACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCT 26347 ||||| || ||||| ||||| ||| || ||||||||||| || || || || || || Sbjct 20700 CCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 20759 Query 26348 TGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAA 26407 |||||||| | |||||| || ||||||||||| || || |||||||| |||||| |||| Sbjct 20760 TGGAATAC-ATCATAAAATTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAA 20818 Query 26408 CTCCCTTGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTA 26467 || ||||| || | || |||| ||||| |||||| ||| |||| | || |||| | Sbjct 20819 CTTCCTTGACCTATTGGGTAAATCAAGAAAACTGCGGTAGCAGCGGCAACAGGAGCTGAA 20878 Query 26468 TATGCAACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCT 26527 ||||||||| ||||| |||| ||| | || | | || |||||||||| | || Sbjct 20879 TATGCAACAGCAATCCAAGGTCGCATATCCAGACGGAAACTAAGTTCCCACTCACGACCC 20938 Query 26528 GCATATGCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATT 26586 || ||||| || | ||||||||| | | || | || ||| || ||||| || Sbjct 20939 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACTATTAATTCATAAGGACCGCCGTT 20997 >seq27014 Length=84001 Score = 138 bits (152), Expect = 3e-28 Identities = 188/259 (73%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 26261 CCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACCCCAGCAACACCAGCCATATGGAAT 26320 || ||||||||| || | | | || |||| | | ||||| ||||| ||| || ||| Sbjct 20181 CCATGCATAGCACTGATAGG-GAGCCGCCGATA-CACCAGCTACACCTAACATGTGAAAT 20124 Query 26321 GGGTGCATGAGTATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGAG 26380 |||||||| || || || || || || |||||||| | |||||| || || ||||||| Sbjct 20123 GGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATAAAATTGAA--TACCAGAA 20066 Query 26381 ATACCAAGAGGCATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACACT 26440 || || |||| ||| ||||| |||||| |||| || | ||||||| ||||| ||| Sbjct 20065 ATTCCTAGAGACATATCATCAGAAAAACTTGCTTGACCTATTGGATAAATCAAGAAAACT 20006 Query 26441 GCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCTAGT 26500 ||| ||| |||| | || | || |||||||||| ||||| |||| ||| || || Sbjct 20005 GCGGTAGCAGCGGCAATAGGAGTTGAATATGCAACAGCAATCCAAGGTCGCATACCCAGA 19946 Query 26501 CTGTAAGATAGTTCCCACT 26519 | | || |||||||||| Sbjct 19945 CGGAAACTAAGTTCCCACT 19927 >seq5280 Length=204759 Score = 131 bits (144), Expect = 5e-26 Identities = 224/321 (70%), Gaps = 3/321 (1%) Strand=Plus/Plus Query 26540 ACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCACTCG 26599 || || | ||||||||| | | || | || ||| || ||||| ||||||| ||| || Sbjct 154056 ACACCAAGTAAGAAGTGTAGAACTATTATTTCATAAGGACCGCCGTTGTATAACCATTCA 154115 Query 26600 TCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAGGGG 26659 || | | | ||||||||||| |||||||| || | || || || | | | || Sbjct 154116 TCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCAATAGCTGCATAAGTAGGA 154175 Query 26660 ACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCACGT 26719 | | || ||||| || ||||| |||||||| | || || || ||||| || ||||| Sbjct 154176 ATAATGGCACCTGAGATAATATTTTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCACG- 154234 Query 26720 ATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTAGTGGC 26778 || ||||| |||||||| || || || || |||||||||| ||||| ||| ||| || Sbjct 154235 ATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACA-AAAGTTGC 154293 Query 26779 TGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCTCAGT 26838 | | |||| || ||||| | || || |||||||| | || ||||| || || || Sbjct 154294 GGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTCGGT 154353 Query 26839 ACTTGTAACCCACTCACAAAA 26859 || || | ||| | ||| || Sbjct 154354 GCTGGTTATCCAGTTACAGAA 154374 >seq28567 Length=163623 Score = 111 bits (122), Expect = 5e-20 Identities = 142/192 (74%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 25883 TCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTAGCTCGG 25942 || || || |||||||||||||| || || ||||||||||| | ||| ||||||| | | Sbjct 83979 TCTAGAGGGAAGTTATGAGCATTTCGTTCATGCATAACTTCCATGCCATGGTTAGCACAG 84038 Query 25943 TTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAAC-ATCTACTACTGACTGGTT 26001 || |||| ||| |||| | | |||| | || || | ||| |||||||| ||||| Sbjct 84039 TTAAATA--TCATCCCAAGAATTAATTA-CACACCCTTGGCTATCAACTACTGATTGGTT 84095 Query 26002 AAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGCCATAT 26061 || || |||||||||||||| || ||||| |||| ||||| | || || | ||| || Sbjct 84096 GAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTAAACCAAAT 84155 Query 26062 GCCAACAACCGG 26073 || || || || Sbjct 84156 ACCCACTACAGG 84167 >seq1151 Length=20901 Score = 109 bits (120), Expect = 2e-19 Identities = 145/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 26666 GCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCACGTATGCCA 26725 || ||||| || |||||||||||||| | || || || ||||| || ||| | || ||| Sbjct 11423 GCACCTGAGATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCATGAATACCA 11364 Query 26726 TCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTAGTGGCTGCGAG 26784 || |||||||| || || || || |||||||||| ||||| ||| | ||| | | | Sbjct 11363 TCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACA-GAAGTTTCGGTCAA 11305 Query 26785 TAA-GCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCTCAGTACTTG 26843 ||| |||||| ||||||| || || |||||||| | || ||||| || || || || | Sbjct 11304 TAAGGCAGGG-ATCATAAAAACACCAAACCATCCAAAGTAAAGACGATTTTCGGTGCTGG 11246 Query 26844 TAACCCACTCACAAAA 26859 | | ||| | ||| || Sbjct 11245 TTATCCAGTTACAGAA 11230 >seq32305 Length=14517 Score = 96.9 bits (106), Expect = 1e-15 Identities = 171/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 26569 TTGATATGGTCCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTA 26628 || ||| || ||| | ||||||| ||| || || | | ||||||||||| || || Sbjct 12487 TTCATAAGGACCGTCGTTGTATAACCATTCATCAACGGATGTTGCTTCCCAGATTGGATA 12546 Query 26629 AAAATGTAGTCCGATTGCGTTAGAGGAGGGGACGACTGCTCCTGATATTATATTGTTTCC 26688 ||| || | || || || ||| | || | | || ||||| || ||||||||||| Sbjct 12547 AAAGTGCAAACCAATAGCTGCAGAAGTAGGAATAATGGCACCTGAGATAATATTGTTTCC 12606 Query 26689 GTACATTAACGAGCCGGAAACTGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGC 26748 ||| | || || || ||||| || ||||| || ||||| |||||||| || | || | Sbjct 12607 GTAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGAAGCAAC 12666 Query 26749 GATGAAGGCAAGTATAAA-ACATGTAGTGGCTGCGAGTAAGCAGGGTATCATAAGCACCC 26807 ||||||| || ||||| ||| | ||| || | | |||| || ||||| | || | Sbjct 12667 AATGAAGGAAATAATAAATACA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACAC 12725 Query 26808 CGAACCA 26814 | ||||| Sbjct 12726 CAAACCA 12732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147007294851840