Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq24293 572 2e-158 seq27014 187 3e-42 seq32758 176 5e-39 seq32305 150 2e-31 seq5280 149 7e-31 seq1151 109 6e-19 seq28127 102 9e-17 seq28567 89.7 6e-13 >seq24293 Length=256785 Score = 572 bits (634), Expect = 2e-158 Identities = 696/946 (74%), Gaps = 2/946 (0%) Strand=Plus/Minus Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070 || ||||| |||||| | ||||||||| | | | | || || | || ||| | Sbjct 206374 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATT 206315 Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130 |||||||||||||| ||||| ||||| |||||||||||||||||||| || |||| ||| Sbjct 206314 GCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCT 206255 Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190 || | || || ||||| || ||||| ||||| || | |||| ||| || |||||| Sbjct 206254 CTACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGT 206195 Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGT 155250 | ||||| || || || |||||||||||| | ||||||| ||||| ||||| || ||| Sbjct 206194 TTGCACTTTTACCCAATCTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGCGGT 206135 Query 155251 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAG 155310 |||| || | |||| | |||||| | | || | | ||| |||||| || Sbjct 206134 CCTTATGAATTAATAGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAG 206075 Query 155311 TGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 155370 ||||||||| || |||||| || ||||| |||||||| ||||||||| || || || Sbjct 206074 TGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCT 206015 Query 155371 GTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGAT 155430 || | ||||| ||| || ||| | |||| || | |||||||| ||| |||||| Sbjct 206014 GTTGCCGCTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCAAGGAAGTTTTTCTGAT 205955 Query 155431 GCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACAC 155490 | |||||||| || || ||||||||||| || | |||| | || ||||| || || ||| Sbjct 205954 GGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATTGTATTCCAGGCTGAGCAC 205895 Query 155491 AATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTT 155550 || |||||||||||||| || |||||| | || ||||| ||||| ||||| || || || Sbjct 205894 AACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTA 205835 Query 155551 TTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAA 155610 ||| ||||||||| ||||| ||||| || ||| | ||| | ||||| || || | Sbjct 205834 TTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAAT 205775 Query 155611 GAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCT 155670 || ||| || | ||||||| ||||| ||||| |||||||||||||| || || || Sbjct 205774 GAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCC 205715 Query 155671 GCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGT 155730 |||||||| || || || || | |||||||| ||||| ||||||||||| | Sbjct 205714 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCA 205655 Query 155731 CTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTG 155790 | ||||| ||||| ||||| |||||||| || | |||||| |||||| | ||| | Sbjct 205654 TTACACTTTTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGGTTTACTGCTTTAGGTATT 205595 Query 155791 TCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGA-CGCTAG 155849 || ||||| |||||||| || |||||||| |||||||| || ||||| || || | Sbjct 205594 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGCCA- 205536 Query 155850 TGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGT 155909 || || || ||| ||||| || ||| ||||||| ||| |||||||||||||| Sbjct 205535 AGGGCGTGTAATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGT 205476 Query 155910 AATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCT 155955 ||||| || ||||| ||||| ||||||||||| || || |||||| Sbjct 205475 TATGCATGAACGTAATGCTCATAACTTCCCTCTAGATCTAGCTGCT 205430 >seq27014 Length=84001 Score = 187 bits (206), Expect = 3e-42 Identities = 256/354 (72%), Gaps = 4/354 (1%) Strand=Plus/Plus Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361 |||||| ||||||||||| || |||||| || ||||| |||||||| ||||||||| Sbjct 19920 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATAT 19979 Query 155362 TCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCT 155421 || | || | | ||||| ||| || ||| | ||||||| | ||||||| | Sbjct 19980 TCAACTCCTATTGCCGCTGCTACCGCAGTTTTCTTGATTTATCCAATAGGTCAAGCAAGT 20039 Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAA 155481 || ||||||| ||| |||| || || ||||||| || || | |||| | || ||||| Sbjct 20040 TTTTCTGATGATATGTCTCTAGGAATTTCTGGTA--TTCAATTTTATGATTGTATTCCAG 20097 Query 155482 GCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGT 155541 || || ||||| |||||||||||||| || |||||| | || ||||| ||||| |||| Sbjct 20098 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT-ATCGGC 20156 Query 155542 GGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACT 155601 || || | | || ||||||||| ||||| ||||| | ||| | ||| | ||||| Sbjct 20157 GGCTC-CCTATCAGTGCTATGCATGGTTCCTTGGTAATTTCTAGTTTGATCAGGGAAACC 20215 Query 155602 ACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACT 155655 | || | || ||| || | ||||||| || || ||||| ||||||||| Sbjct 20216 AAAGAAAATGAATCTGCTAATGAAGGTTACAGATTAGGTCAAGAGGAAGAAACT 20269 >seq32758 Length=53022 Score = 176 bits (194), Expect = 5e-39 Identities = 183/239 (77%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361 |||||| ||||||||||| || |||||| | ||||| |||||||| ||||||||| Sbjct 20937 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGATATGCGACCTTGGATTGCTGTTGCATAT 20878 Query 155362 TCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCT 155421 || || || || | ||||| ||| || ||| | |||| || | |||||||| | Sbjct 20877 TCAGCTCCTGTTGCCGCTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCAAGGAAGT 20818 Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAA 155481 || ||||||| |||||||| || || ||||||||||| || | |||| | || ||||| Sbjct 20817 TTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGAT-GTATTCCAG 20759 Query 155482 GCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGG 155540 || || ||||| |||||||||||||| || |||||| | || ||||| ||||| ||||| Sbjct 20758 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGG 20700 >seq32305 Length=14517 Score = 150 bits (166), Expect = 2e-31 Identities = 178/241 (74%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 155014 TGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCC 155073 ||||| |||||| | ||||||||| | | | | || || | || ||| | || Sbjct 12732 TGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTTCC 12673 Query 155074 TTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTA 155133 ||||||| ||| |||| ||||| |||||||||||||||||||| || |||| ||| || Sbjct 12672 TTCATTGTTGCTTCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTA 12613 Query 155134 ATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTC 155193 | || || ||||| || ||||| ||||| || | |||| ||| || |||||| | Sbjct 12612 CTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTG 12553 Query 155194 CACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCT 155253 ||||| ||||| || ||||||||| || | ||||||| ||||| ||||| | |||||| Sbjct 12552 CACTTTTATCCAATCTGGGAAGCAACATCCGTTGATGAATGGTTATACAACGACGGTCCT 12493 Query 155254 T 155254 | Sbjct 12492 T 12492 >seq5280 Length=204759 Score = 149 bits (164), Expect = 7e-31 Identities = 194/267 (73%), Gaps = 1/267 (0%) Strand=Plus/Minus Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070 || ||||| |||||| | ||||||||| | | | | || || || ||| | Sbjct 154332 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTTTGTATTTATTATT 154273 Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130 |||||||||||||| ||||| ||||| ||||||||||| |||||||| || |||| ||| Sbjct 154272 GCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTAT-CGTGAACCTGTTTCTGGATCT 154214 Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190 || | || || || || || ||||| ||||| || | |||| || || |||||| Sbjct 154213 CTACTTTACGGAAAAAATATTATCTCAGGTGCCATTATTCCTACTTATGCAGCTATTGGT 154154 Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGT 155250 | ||||| || || || |||||||||||| | ||||||| ||||| ||||| || ||| Sbjct 154153 TTGCACTTTTACCCAATCTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGCGGT 154094 Query 155251 CCTTTCCAACTTGTAGTCTTCCACTTC 155277 |||| || | |||| | |||||| Sbjct 154093 CCTTATGAAATAATAGTTCTACACTTC 154067 Score = 120 bits (132), Expect = 4e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 155509 TTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGT 155568 || |||||| | || ||||| ||||||||||| || || || ||| | ||||||| ||| Sbjct 175408 TTTCACATGTTAGGTGTAGCTGGTGTGTTCGGCGGCTCCCTATTCAGTTCTATGCATGGT 175467 Query 155569 TCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGT 155628 || || || || ||| | || | ||||| || | | || ||| | || | ||| Sbjct 175468 TCCTTTGTAACTTCTAGTTTGATTAGGGAAACCACATAAAATGAATCTGATAATGAAGGT 175527 Query 155629 TACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGT 155688 |||| ||| | ||||| |||||||||||||| || || || |||||||| || || || Sbjct 175528 TACAGATTCAGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGA 175587 Query 155689 CGTCTTATCTTCCAGTATGCATCCTTCAACAACT 155722 || | ||||||| ||||| |||||||||| Sbjct 175588 CGATTGTTCTTCCAATATGCTAGTTTCAACAACT 175621 >seq1151 Length=20901 Score = 109 bits (120), Expect = 6e-19 Identities = 128/171 (75%), Gaps = 8/171 (5%) Strand=Plus/Plus Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCG-CTGCTGCTACATGCTTCATTGT 155069 || ||||| |||||| ||||||||||| |||| | | | | || | || ||| | Sbjct 11272 GGATGGTTTGGTGTTTTTATGATCCCT-GCCTTATTGACCGAAACTTCTGTATTTATTAT 11330 Query 155070 CGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTC 155129 |||||||||||||| ||||| ||||| ||||||||||||| |||||| || |||| || Sbjct 11331 TGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCATGAACCTGTTTCTGGATC 11390 Query 155130 TTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAA 155180 | || | || || ||||| || ||||| ||||| ||| |||||||| Sbjct 11391 TCTACTTTACGGAAACAATATTATCTCAGGTGC------CCCCAGTTCAAA 11435 >seq28127 Length=41111 Score = 102 bits (112), Expect = 9e-17 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361 |||||| ||||||||||| || |||||| | ||||| |||||||| ||||||||| Sbjct 29552 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGATATGCGACCTTGGATTGCTGTTGCATAT 29611 Query 155362 TCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCT 155421 || || || || | ||||| ||| || ||| | |||| || | |||||||| | Sbjct 29612 TCAGCTCCTGTTGCCGCTGCTACCGCAGTTTTCTTGATTTACCCAATAGGTCAAGGAAGT 29671 Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTA 155455 || ||||||| |||||||| || || ||||||| Sbjct 29672 TTTTCTGATGGTATGCCTCTAGGAATTTCTGGTA 29705 >seq28567 Length=163623 Score = 89.7 bits (98), Expect = 6e-13 Identities = 143/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 155755 CCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAAC 155814 ||||| || | || ||| |||||| | ||| | || ||||| |||||||| || Sbjct 84167 CCTGTAGTGGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAAT 84108 Query 155815 GGTTTCAACTTCAACCAGTCTGTAGTAGAC-GCTAGTGGTAAAGTCATCCCTACATGGGC 155873 |||||||| |||||||| || ||||| || || | ||| || || | | |||| Sbjct 84107 GGTTTCAATTTCAACCAATCAGTAGTTGATAGCCAAGGGTGT-GTAATTAATTCTTGGGA 84049 Query 155874 AGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 155933 || ||| |||| | ||| | ||| |||||||| ||||| || || || ||||| || Sbjct 84048 TGATATT--TAACTGTGCTAACCATGGCATGGAAGTTATGCATGAACGAAATGCTCATAA 83991 Query 155934 CTTCCCTCTTGACCTTGCTGCT 155955 ||||||||| || || | |||| Sbjct 83990 CTTCCCTCTAGATCTAGATGCT 83969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581898216109120