Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq33768 87.8 6e-13 >seq33768 Length=156001 Score = 87.8 bits (96), Expect = 6e-13 Identities = 176/257 (68%), Gaps = 7/257 (3%) Strand=Plus/Minus Query 31539 ACTTGCGGGTTTGCAGCTTGCCCTCGATGTAAACCTTCGATCCCTTTTTCAGGTATTGCT 31598 ||||| ||| ||||| ||||||||||| |||| | || || |||||||| | Sbjct 53378 ACTTGTCGGTGCGCAGCGAACCCTCGATGTAGACCTGCCGGCCTTTCTTCAGGTACTCGC 53319 Query 31599 CGCAAACCTTGACGAGACCTTCGGTGAAGACGACGACGCTATGCCACTCGGTGCGCTCCT 31658 || | || | | || ||| | ||| | |||| ||||| ||||||||||||| Sbjct 53318 CGGCGATCTCGGCCAG--CTT-GCCGAACAGCTTCACGCGGTGCCATTCGGTGCGCTCCT 53262 Query 31659 TGCGGTCGCCGCTGTCGCGGTCGCGCCAGCTTTCGGAAGTCGCAAGGCGAAGGCTGGCGA 31718 ||| |||||||| | |||| ||| ||| ||||| || | ||| ||||||| || Sbjct 53261 GGCGCTCGCCGCTCTGCTTGTCGGTCCACTGTTCCGAAGTGGCGATGCGCAGGCTGGTGA 53202 Query 31719 TG--CTACCCCCGGCTTGTGTCTTTCGGATTTCCGGATCGGCGCCGAGATGGCCGATAAG 31776 || || | || ||| | ||| |||||||||||||||| || | ||||| | Sbjct 53201 TGGCGGTGCCGCTGCCGGTG--TAGCGGGTTTCCGGATCGGCGCCTAGGTTGCCGACGAT 53144 Query 31777 AATGACTTTGTTGACGC 31793 ||||| ||||||| || Sbjct 53143 GATGACCTTGTTGATGC 53127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 168994694411136