Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq33802 280 2e-70 seq33775 105 1e-17 seq33810 95.1 2e-14 >seq33802 Length=298597 Score = 280 bits (310), Expect = 2e-70 Identities = 321/430 (75%), Gaps = 6/430 (1%) Strand=Plus/Plus Query 35452 GGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGT 35511 ||||||| ||| |||||||||||| || |||||||||||| ||| | | |||||| Sbjct 233819 GGGTCACGCCCTGCTGGCCCTGGTACTTGCCGCCGCGATCCCGGTAGCTGGTCTCGCAGG 233878 Query 35512 CCTCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCG 35571 |||||| ||||| ||||||||||||||||| |||||||| ||||| | ||||| Sbjct 233879 GCTCGTCGGATTCGAAGAACAGCATCTGCGCCACGCCTTCGTTGGCGTAGATCTTCGCCG 233938 Query 35572 GCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCG 35631 |||| || |||||| ||| ||||| ||||| || |||||||| || || ||||||| Sbjct 233939 GCAGCGGCGTGGTGTTGGAGAATTCCAGCGTCACGTGGCCTTCCCATTCCGGCTCCAGCG 233998 Query 35632 GCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGA 35691 | || |||||||||||||| || |||||||| ||||||||||| |||| |||||||| | Sbjct 233999 GGGTGACGTTGACGATGATGCCGCAGCGCGCATAGGTGCTCTTGCCCAGGCACACCACCA 234058 Query 35692 GGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCG 35751 | |||| ||||||||||||||| || || |||||||| ||||| |||||| ||| |||| Sbjct 234059 GCACGTCGCGCGGAATGCGGAAATACTCCACCGTGCGCGCCAGCGCGAAGGAGTTGGGCG 234118 Query 35752 GAATCAGGATGCTGTCAGCCTTAACCGGCTGCAGGCACTTG---GGATCGAAGTTCTTCG 35808 | || ||||| | || ||| | || | | || || ||||| ||||| Sbjct 234119 GGAT---GATGCACACGTCCGACACCACGTCCACGAAGCTGTCCGGGTCGAACGCCTTCG 234175 Query 35809 GATCAACCACTGCGCTGTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCACGCACGT 35868 | || || | | | ||||||||||||||| || | |||| || |||||||| Sbjct 234176 GGTCGACAATGGTGGAGTTGATGTTGGTGAACACCTTGAACTCGCGCGCGCAACGCACGT 234235 Query 35869 CATAACCATA 35878 | || || || Sbjct 234236 CGTAGCCGTA 234245 >seq33775 Length=276061 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 ||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||||||| Sbjct 52367 GCCGGCATAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGTAGGTCGCGGGTTCGATT 52308 Query 120288 CCTGATGCCGGCA 120300 |||| |||||||| Sbjct 52307 CCTGCTGCCGGCA 52295 >seq33810 Length=274286 Score = 95.1 bits (104), Expect = 2e-14 Identities = 198/292 (68%), Gaps = 10/292 (3%) Strand=Plus/Minus Query 186128 AGTTGCTGACGCACTTGGTTGACGTGGTTGGAGTAGATATGCGCGTCGCCGAACGTGTGG 186187 || ||| | ||| | || | || |||||| ||| | |||||||||||| | |||||| Sbjct 221820 AGCTGCAGTCGCGCCTGTTCCACATGGTTGTTGTACAGATGCGCGTCGCCCAGCGTGTGC 221761 Query 186188 AACAGCTTGCCTGATGCCAGGCCGAATGCCTGTGCCAGCATGTGCGTCATGATAGAGTAG 186247 | | | ||| |||| ||| | |||| |||| |||||| || | | | ||| Sbjct 221760 ACGAAGTCGCCCACGCCCAGCCCGCACACCTGCGCCACCATGTGGGTGAGCAGCGCATAG 221701 Query 186248 AAGCCGAAGTTAAAAGGCACGCCGAGGAAGAAATCCCCGCTACGCTGATAGAGCTTGCAG 186307 | ||| ||| || |||||||||||||||| || ||| ||||| || |||| |||| Sbjct 221700 CTGGCGATGTTGAACGGCACGCCGAGGAAGATGTCGCCGGAGCGCTGGTACAGCTGGCAG 221641 Query 186308 TCCAGCGT---CGGTTGCCCGTGAGCACCTTC-----GCGCACGCACCATTGCGAAAGCG 186359 |||| | || || || ||||| || || | |||| | | || | |||| Sbjct 221640 CTCAGCTTGCCCGCCTGTCC-TGAGC-CCGTCGAAGGGGCCACGTAGAACTGGAACAGCG 221583 Query 186360 TATGGCACGGCGGCAGCGCCATCTCATCCAGACGGCTCACGTTCCACGCACT 186411 | ||||| ||| ||||||||||| ||| || |||||||||||| || Sbjct 221582 TGTGGCAGGGCATCAGCGCCATCTTCGGCAGCTCGCCCACGTTCCACGCGCT 221531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 821769128422080