Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq938 167 4e-35 seq33810 152 8e-31 seq29890 149 1e-29 seq2648 100 4e-15 seq28025 96.9 5e-14 seq33853 95.1 2e-13 seq33763 93.3 7e-13 seq25579 91.5 2e-12 >seq938 Length=1173706 Score = 167 bits (184), Expect = 4e-35 Identities = 208/284 (73%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 794380 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAG 794439 || |||||||||||||| ||||| | |||||| ||||| ||||| || || ||||| || Sbjct 1020802 CCTGGCATGAGGCCGCGTTTCTTCAACCAAAATATGGCGCAGAAGCTCCCGGAGAAGAAT 1020861 Query 794440 ATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTG 794499 || ||||| ||| |||||| ||| |||||||||||||||| || || | | Sbjct 1020862 ATCCCCTCAACGCAAGCAAAGGCGAGTAGCCGCTCGGCAAAAGATTC--GG----ATCCG 1020915 Query 794500 TTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG 794559 | |||||| | ||||||| ||||| ||| ||| | || || ||||| || || Sbjct 1020916 TCGATCCAACGTAGGGCCCACTTGGCCTTCTTCTCCACGCATGGGACTGTGTCAATAGCT 1020975 Query 794560 CGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAG 794619 || |||||| | ||||||| ||| || |||| ||| || |||| || || ||| Sbjct 1020976 CGGAAGAGGCGACTCTTCTCGGCCGAATCTTTGATGTATGTTTCGAGCAGAAGACTGTAC 1021035 Query 794620 GTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAA 794663 |||| ||||||||||| ||||| || |||||||| || ||||| Sbjct 1021036 ATCTCGGAGTGGATGTTCTCGATTGCAATCTGGAATCCGTAAAA 1021079 Score = 138 bits (152), Expect = 2e-26 Identities = 182/250 (73%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || ||||| || |||||||| | ||| || || ||||| |||||||| Sbjct 1021087 GCCTCGGAAACCTGGACTTCTTTCATGAACCTGCCAGCTAGATTCTCCAAAACGATGCCA 1021146 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||| || || ||||| || || || ||||| || || ||| ||| | |||| Sbjct 1021147 TCGGAGGCAGCAAAGAAGGCCAGAACATGTTTGATGAAATGCTTCTCATCGGCAGTGAGG 1021206 Query 796270 GAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 | |||||||| | ||| ||| | | || ||||||||||| ||||||||||| || Sbjct 1021207 GCTTCCCAGTGGGCGAGGTCCTGCGACAAA-TCTACCTCCTCGGCTGTCCAAAAGGAAGC 1021265 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCG 796388 |||||||| |||||||| ||||| ||| | |||| |||||||||| | ||||| Sbjct 1021266 TTCGGCCTTCTTGTACATTTCCCAAATCTGAGGGTACTCAATGGGGAACATACAGAAGCG 1021325 Query 796389 ATTGGGGTTC 796398 | |||||| Sbjct 1021326 GTCTGGGTTC 1021335 >seq33810 Length=274286 Score = 152 bits (168), Expect = 8e-31 Identities = 252/360 (70%), Gaps = 9/360 (3%) Strand=Plus/Minus Query 2175029 GTGTGGCTGCGCGGCGGTGCGCACGGCATCGAGCGCCGTTGCCACGCTGCCGTCGGTGCC 2175088 ||| || |||| ||| | |||| ||||| | |||| |||| ||||||||||||| Sbjct 175932 GTGCGGATGCGAGGCCGCCTGCACCGCATCCACCGCCAGCTTCACGTTGCCGTCGGTGCC 175873 Query 2175089 GTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTGCACCTGGCTCTC 2175148 ||| || || || ||||| | | ||| |||| |||| |||||||||||||||||||| Sbjct 175872 GTTCTTGAAGCCCACCGGGCAGGACAGTCCCGAAGCCAGCTCGCGGTGCACCTGGCTCTC 175813 Query 2175149 GGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAATAGGGCGCCACCAA 2175208 |||||| || ||||| | |||||||| ||||| ||||| || | || ||| | | Sbjct 175812 GGTGGTACGTGCGCCGATCGCGCCCCAGGCCACCAGGTCGGCGAGGTACTGCGGCGAGAT 175753 Query 2175209 AGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGA---CGACCAGGTCGCGCAG 2175265 | ||| |||||| | ||| ||| ||| ||| | | || | ||||||||| Sbjct 175752 GATGTCGAGGAACTCG-CTGCC---GGCCGGC--ACGCCCAGCGCGTTGATGTCGCGCAG 175699 Query 2175266 CAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTC 2175325 ||| | |||| || ||||| | | |||| | ||||| ||||| ||||| Sbjct 175698 CAGGCCGCGCGCGATGCGCAGGCCCTGGTTGATGCGGAAGCTGCCGTCCAGGTCCGGGTC 175639 Query 2175326 GCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGAC 2175385 | || ||| |||||||| || || || ||||||||||| |||| || | ||||| || Sbjct 175638 GTTGATCAGTCCCTTCCAGCCCACCGTGGTGCGCGGCTTCTCGAAGTACACCCGCATCAC 175579 >seq29890 Length=111316 Score = 149 bits (164), Expect = 1e-29 Identities = 184/249 (74%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | || ||||||||||||||||| ||||| || |||||||| ||||||||| Sbjct 72772 GCCTCCGAGACCTGGACCTCCTTCATGAATCGGCCCGCAAGGTTCTCCAATACGATGCCG 72831 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| |||||||| |||||||| ||||| ||||| || || |||||| | | || Sbjct 72832 TCGGATGCGGCGAAGAAGGCGAGCACGTGTTTGATGAAATGCTTCTCGTCAGCAGTAAGA 72891 Query 796270 GAGACCCAGTGGACCGTG-TCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 | | |||||| | | | | || | | ||||||||||| || ||||| |||||||| Sbjct 72892 GCGTCCCAGT-GTCGGAGATCCTGGGACAAATCGACCTCCTCAGCCGTCCAGAAGGAGGC 72950 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCG 796388 ||||| || |||||||||||||| || | |||| | || ||||||| | || || Sbjct 72951 TTCGGCTTTCTTGTACATCTCCCAGATTTGAGGGTACTGTATCGGGAACATACAGAATCG 73010 Query 796389 ATTGGGGTT 796397 || ||||| Sbjct 73011 ATCTGGGTT 73019 Score = 116 bits (128), Expect = 6e-20 Identities = 222/325 (68%), Gaps = 8/325 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTT-GCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 |||||||| | ||| || ||||| | |||| || || ||||| || || ||||| Sbjct 72448 CCTTCGTCTCTGGAGATTAACTCGTTCGAGAAAGTC-AGTCCCGGCATTAGCCCTCGCTT 72506 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 |||||||| || |||| ||||| || || || || || || || ||||| || || Sbjct 72507 TTTGAGCCAGAATATGGAGCAGAAGCTTCCGGAAAAGAATATACCTTCGACACAAGCGAA 72566 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | || | ||||| ||||| | ||| ||||| |||||| | ||||| Sbjct 72567 GGCCACTATTCGCTCCGCAAACGACTCCGACCCCTC------GATCCAGCGGAGGGCCCA 72620 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 || ||||| || | |||| | || ||||| ||| | ||||| ||| |||||| Sbjct 72621 CTTGGCCTTCGTCTCGATGCAGGGGATGGTTTCGATCGCGTGGAAGAGCAGGTTCTTCTC 72680 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | | || |||| ||| || |||| | ||| ||| |||| ||||||||||| || Sbjct 72681 CGCGGAATCTTTGATGTAAGTTTCGAGCAAGAGGCTGTACATCTCGGAGTGGATGTTCTC 72740 Query 794640 GATGGCGATCTGGAAGCCATAAAAG 794664 ||||||||||| ||||| || ||| Sbjct 72741 TATGGCGATCTGAAAGCCGTAGAAG 72765 >seq2648 Length=386747 Score = 100 bits (110), Expect = 4e-15 Identities = 167/239 (70%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 ||||| |||||||||||||| || ||||| |||||| | || || || ||| | | | | Sbjct 366137 TTGGTAACGGCCTTGGTACCTTCGGAGACAGCGTGCTTAGCAAGCTCACCGGGAAGCACC 366078 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCC 1485594 | | ||||| |||||||||||||| | | ||| ||| |||||| ||| || Sbjct 366077 AACCTGACGGCAGTCTGGATCTCGCGAGAGGTGATGGTGGGCTTCTTGTTGTAGCGAGCG 366018 Query 1485595 AGGC-GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653 || | || || | | | ||| || |||| || ||||||| || ||||||||| Sbjct 366017 AGACGGGACGACTCCTGCGCCAAT-TTCTCGAAAATATCGTTGATGAAGCTGTTCATGAT 365959 Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712 ||| | ||| | ||||| || | ||| ||||| ||||| || || |||||| ||| Sbjct 365958 ACCCATGGCCTTGCTAGAGATTCCGATGTCTGGGTGGACCTGTTTCAGGACCTTGAAAA 365900 Score = 100 bits (110), Expect = 4e-15 Identities = 167/239 (70%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 ||||| |||||||||||||| || ||||| |||||| |||| || || ||| | | | | Sbjct 369501 TTGGTAACGGCCTTGGTACCTTCGGAGACAGCGTGCTTGGCAAGCTCACCGGGAAGCACC 369560 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCC 1485594 | | ||||| |||||||||||||| | | ||| ||| |||||| ||| || Sbjct 369561 AACCTGACGGCAGTCTGGATCTCGCGAGAGGTGATGGTGGGCTTCTTGTTGTAGCGAGCG 369620 Query 1485595 AGGC-GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653 || | || || | | | ||| || |||| || ||||||| || |||||| || Sbjct 369621 AGACGGGACGACTCCTGCGCCAAT-TTCTCGAAAATATCGTTGATGAAGCTGTTCATAAT 369679 Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712 ||| | ||| | ||||| || | ||| ||||| ||||| || || |||||| ||| Sbjct 369680 ACCCATGGCCTTGCTAGAGATTCCGATGTCTGGGTGGACCTGTTTCAGGACCTTGAAAA 369738 >seq28025 Length=485539 Score = 96.9 bits (106), Expect = 5e-14 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 |||||||| || ||||| ||||| || || |||||| | || || || ||| ||| | Sbjct 74723 TTGGTGACAGCTTTGGTGCCCTCCGAAACAGCGTGCTTCGCGAGCTCACCGGGCAGCACA 74782 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCC 1485594 || | || |||||||||||||| || | | || ||| |||||| ||||| Sbjct 74783 AGCCTGACCGCGGTCTGGATCTCCCGAGAGGTAATGGTGGGCTTCTTGTTGTACCGCGCT 74842 Query 1485595 AGGCGGCCGGCCTCG-GTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653 ||||| || ||| | ||| || |||| || || |||| || |||||| || Sbjct 74843 AGGCGAGATGCTTCGTGCGCCAAT-TTCTCGAAAATATCATTGATGAAGCTGTTCATTAT 74901 Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||| | ||| ||||||| || | |||||| ||||||||||| ||||||||| Sbjct 74902 ACCCATGGCCTTGCTGGAGATCCCGATGTCGGGATGCACCTGCTTCAGCACCTTG 74956 >seq33853 Length=384389 Score = 95.1 bits (104), Expect = 2e-13 Identities = 137/190 (72%), Gaps = 10/190 (5%) Strand=Plus/Minus Query 2071825 AAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGG 2071884 || ||||||||||||||| | || ||||||||||||| ||| |||| | | ||| Sbjct 87754 AACAGCGACCAGTCGCCGTCGCTCTCCACGCGGCGCATGAACTCGTCGG--GAACCCAGT 87697 Query 2071885 CCGTAAAA--GAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGA 2071942 || | ||||| | ||| ||| | |||| | |||| ||| | ||| || | Sbjct 87696 TCGCGAGGTTGAGATTGTGCGTGCGGCGCGCCTCGTCGCCGGTGTTGTCGCGCAGCTCCA 87637 Query 2071943 GCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA---GCAGGCAAAGGCGCCCTTGC 2071999 | | || ||| |||||||||||| ||||||||||| |||||| ||||||||||| Sbjct 87636 GGAATTCCTCGATGTCGGCGTGCCAGGGCTCCAGGTACACGCAGGC---GGCGCCCTTGC 87580 Query 2072000 GCTTGCCGCC 2072009 |||||||||| Sbjct 87579 GCTTGCCGCC 87570 >seq33763 Length=191500 Score = 93.3 bits (102), Expect = 7e-13 Identities = 195/283 (69%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 118619 CTTGCGCACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGCACGACGCCGACGCC 118678 |||| ||||||||||| || || |||| |||| | | |||| ||| || | ||||| Sbjct 20868 CTTGTGCACGCCGCGCGTGGTCATGCACTCGTGGCTGGCGTCGATCACCACCGCCACGCC 20927 Query 118679 GCGCGCGCCCGTGACCTCGCTG-ATGCTCTCGGCGATCTGGCGCG-TGAGCGCCTCCTGC 118736 | || || || | ||| |||| | ||||||||| |||| ||||| |||||| Sbjct 20928 GGCCG-GCTGCAGATTTTCCTGGATGCAGTGGGCGATCTG-CGCGGTGAGCTTCTCCTGT 20985 Query 118737 ACCTGGAAGCGGTCCG-AGAGCATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGAT 118795 |||||||||||| || | ||| ||| || | ||| | | |||||| | ||||| | Sbjct 20986 ACCTGGAAGCGGCGCGCATAGC-CGTCCACCACGCGGGCCAGCTTGCTGATGCCGACCAC 21044 Query 118796 CCTGCCCGCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTC 118855 | || | |||||||||||| ||||| || ||||| | ||| || ||||| || Sbjct 21045 GCGGCAGGTGGGCAGGTAGCCGACGTGGGCGCGGCCGACGATCGGCGCCATGTGGTGTTC 21104 Query 118856 GCACATGGAGAAAAAGTCAATGTCGCGCACGGTCACCATCTCG 118898 ||| | || || |||||||||| |||||||||| Sbjct 21105 GCAGTGGCTCTCGAACTCGATGTCGCGCAGCACCACCATCTCG 21147 >seq25579 Length=234269 Score = 91.5 bits (100), Expect = 2e-12 Identities = 164/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||| || || ||||||||||| || || |||||| | || || || ||| | | || Sbjct 228207 ACTTGGTCACAGCTTTGGTACCCTCGGAAACAGCGTGCTTCGCGAGCTCACCGGGAAGGA 228266 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 ||| | ||||| ||||||||||| |||| |||||| |||||| | || Sbjct 228267 CCAGCCTCACGGAAGTCTGGATCTCCCGGGAAGTGATCGTCGGCTTCTTGTTGTACCTCG 228326 Query 1485593 CCAGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 | || ||| | | || ||| ||| |||| |||||||||| || ||||||| Sbjct 228327 CGAGTCGGGCCGATTC-CTGCGCGAGCTTCTCGAAAATGTCGTTGATGAAGCTGTTCATG 228385 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 || ||| | ||| | ||||| || | |||||| || || ||||| || || ||| Sbjct 228386 ATGCCCATGGCCTTGCTAGAGATCCCGATGTCGGGATGAACTTGCTTCAGGACTTTG 228442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7873510207369128