Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq78578 187 7e-43 seq33768 105 2e-18 seq12962 84.2 6e-12 >seq78578 Length=1014 Score = 187 bits (206), Expect = 7e-43 Identities = 220/298 (74%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 23414 GGCGACCACCAAGCAGCAGAAGTTCGCCTCTGAAGCTGTCCACCACAATTTCGGTGGTGT 23473 ||||||| || |||||| ||||| ||| | | ||| || || || |||||||||| Sbjct 204 GGCGACCGCCGAGCAGCTGAAGTCGGCCATTCACCTGGTCGACGACGATCTCGGTGGTGT 263 Query 23474 AGTTGGTCGCGCCGTCTTTTTCCCACTTGCGTGTCTGCAGCTTGCCGATGATCGCGCATT 23533 || || | |||||||||||||||| ||| || | || |||| || ||| | Sbjct 264 AGCGTTTCACTCCGTCTTTTTCCCACTCGCGGGTGCGGAGAGTGCCTTCGACGTAGCACT 323 Query 23534 CACTTCCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGC 23593 || || || ||||||||||| || || || ||||||| ||||||||||||||| |||| Sbjct 324 GGCTCCCTTTTCGCAGATACTCACCCGCGATTTCGGCGATCTTGCCGAAGAACACTACGC 383 Query 23594 GGTGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACG 23653 ||||||| ||||| |||| ||| |||||||||||| || |||||| |||| | Sbjct 384 GGTGCCACTCGGTACGCTCCTGCTGCTGGCCGGTCTGCTTATCTTTCCAGCTTTCGCTGG 443 Query 23654 TGGCCAGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTC 23711 |||||||| | ||||| ||||| | |||||| | |||||| ||||||||||| Sbjct 444 TGGCCAGGGTTATGTTCGTTACGGCGTTGCCGTTCGGGGTGTAGCGGACTTCCGGGTC 501 >seq33768 Length=156001 Score = 105 bits (116), Expect = 2e-18 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 23547 CAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGCCATTCGGT 23606 ||| ||||||||||| |||||||| | ||||||||| | | ||||||||||||||||| Sbjct 53329 CAGGTACTCGCCGGCGATCTCGGCCAGCTTGCCGAACAGCTTCACGCGGTGCCATTCGGT 53270 Query 23607 CTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGC 23657 |||| |||||||||| |||||||||| |||| |||||| ||||| Sbjct 53269 GCGCTCCTGGCGCTCGCCGCTCTGCTTGTCGGTCCACTGTTCCGAAGTGGC 53219 >seq12962 Length=520891 Score = 84.2 bits (92), Expect = 6e-12 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 21063 TGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCC 21122 ||| | |||||||| ||||||||| || |||| | | ||||| ||| | | ||||||||| Sbjct 439239 TGGTGCCCCCGACACGATTCGAACGTGCGACCTTCCCCTTAGGAGGGGGACGCTCTATCC 439180 Query 21123 AGCTGAGCTACGGGGCCGA 21141 ||||||||||||||| ||| Sbjct 439179 AGCTGAGCTACGGGGGCGA 439161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138618707013024