Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq17685 89.7 2e-13 seq11782 89.7 2e-13 seq20592 86.0 2e-12 >seq17685 Length=293964 Score = 89.7 bits (98), Expect = 2e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 194652 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 194711 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 194712 CTGCTCTAC-CCGC 194724 >seq11782 Length=272197 Score = 89.7 bits (98), Expect = 2e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 147952 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 147893 Query 50170 CTGCTCTACTCCGC 50183 | ||||||| |||| Sbjct 147892 CAGCTCTACCCCGC 147879 >seq20592 Length=139518 Score = 86.0 bits (94), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | | ||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 118318 GTTGCGGAGACAGTATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 118377 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 118378 CTGCTCTAC-CCGC 118390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180736806545424