Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_025428.1 Length=59601 Score E Sequences producing significant alignments: (Bits) Value seq33767 105 3e-18 >seq33767 Length=185007 Score = 105 bits (116), Expect = 3e-18 Identities = 304/454 (67%), Gaps = 18/454 (4%) Strand=Plus/Minus Query 36727 CGACAGCTTGTTTGGGCATGAACGTCGCGGCCTCGGTGTCCCGCACCGC-CTGTTCGTCC 36785 |||| |||||| | || | |||||||| | ||| || ||||| || ||| || | Sbjct 139467 CGACGCCTTGTTCGCCCAGATAGGTCGCGGCTTGGGTATCGCGCACTGCACTGGCCG-CG 139409 Query 36786 ATGTCCCGATTCCGTGCCACGGTGGACACGAAAATGTCGTAGAGCGCGTCGGCGCGCTCC 36845 || | || || || || |||||| ||||| | ||| | | |||| | | || Sbjct 139408 ATCTTTCGGTTGCGGGCGACGGTGTTGACGAACAACTCGCCCATGGTGTCGATGTCCGCC 139349 Query 36846 TGGAAGCGCGCCCGAACCTCGTCGGACAGCGGC---TCAAAAGGGCTG-CCATCCGCTTT 36901 || ||||||||| | |||| | ||| ||||| || ||| || || || || || Sbjct 139348 TGAAAGCGCGCCAGCGCCTCCTTGGAAAGCGGGATTTC----GGGATGACCGTCGGCCTT 139293 Query 36902 GTGTTCGCCCGCGTAAATCATCGTGATCTTGATGCCCAT-TCTCTCCGC-CATCGCGGAG 36959 | | ||||| | || | || | ||||| ||| || || || || ||| || Sbjct 139292 GCGGTCGCCATAGGTGATGAAGGTCACCTTGAAACCCGCGTCGGTCAGCGCAGCGCTGAA 139233 Query 36960 ACATCGGCGTGT-TGCATGATGACGCCGATCGAGCCGACGCCTCCGGTACGGGCCACCGT 37018 | ||| | || |||| |||||||||||| ||| ||| || || || | ||| || Sbjct 139232 A--TCGACATGCATGCA-GATGACGCCGATGCTGCCCGTGCCGCCCGTGCGCGGCACGGT 139176 Query 37019 GATCGTGTCGGCTGCCGACGCGATAGCGTAGGCCGCTGAATAGGCGCTCTCGTTC-GCAT 37077 || ||||| || ||||| || |||||||| || |||||||| ||| | | || Sbjct 139175 AATGCGATCGGCCGCGCTGGCGATGGCATAGGCCGCCGAGTAGGCGCTGTCGCTGAGGAT 139116 Query 37078 ACGCCCGGATCGGCTTCGCACCGCGCGCCGCGTAGATGGCGTCCGCGCAGTCGAAGCAGC 37137 || || |||||||||| ||||| | |||||||||| || | |||||| |||| Sbjct 139115 -CGACCAGATCGGCTTCTTGCCGCGGGAGGCGTAGATGGTATCGACCAGGTCGAAACAGC 139057 Query 37138 CCGCCACCGTCCCGCCGGGCGAGTCGATGTCGAG 37171 ||| |||| |||||||||||||| | ||| || Sbjct 139056 CCGACACCTCGCCGCCGGGCGAGTCCACGTCCAG 139023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189692276933712