Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq339907 107 2e-18 seq25458 107 2e-18 seq18673 107 2e-18 >seq339907 Length=279 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| | ||||| ||| |||||||| || || | | Sbjct 52 GACTCCTTTTGAATGTTGTAGTCAGCAAGCGTACGACCATCCTCGAGCTGCTTGCCAGCA 111 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || ||||||||||| || ||| || ||| | Sbjct 112 AAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTAGCTTTAACA 171 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | |||||| || | ||| | |||||| ||||| | ||| || Sbjct 172 TTATCAATGGTATCTGAACTCTCCACCTCCAACGTGATCGTTTTCCCAGTTAAAGTCTTC 231 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 232 ACGAAAATCTGCAT 245 >seq25458 Length=394795 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| | ||||| ||| |||||||| || || | | Sbjct 385848 GACTCCTTTTGAATGTTGTAGTCAGCAAGCGTACGACCATCCTCGAGCTGCTTGCCAGCA 385789 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || ||||||||||| || ||| || ||| | Sbjct 385788 AAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTAGCTTTAACA 385729 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | |||||| || | ||| | |||||| ||||| | ||| || Sbjct 385728 TTATCAATGGTATCTGAACTCTCCACCTCCAACGTGATCGTTTTCCCAGTTAAAGTCTTC 385669 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 385668 ACGAAAATCTGCAT 385655 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| | || || ||| |||||||| || || | | Sbjct 387808 GACTCCTTTTGAATGTTGTAGTCAGCAAGCGTGCGACCATCCTCGAGCTGCTTGCCAGCA 387749 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || ||||||||||| || ||| || ||| | Sbjct 387748 AAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTAGCTTTAACA 387689 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | |||||| || | ||| | |||||| ||||| | ||| || Sbjct 387688 TTATCAATGGTATCTGAACTCTCCACCTCCAACGTGATCGTTTTCCCAGTTAAAGTCTTC 387629 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 387628 ACGAAAATCTGCAT 387615 >seq18673 Length=525508 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| | || || ||| |||||||| || || | | Sbjct 465916 GACTCCTTTTGAATGTTGTAGTCAGCAAGCGTCCGACCATCCTCGAGCTGCTTGCCAGCA 465975 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || ||||||||||| || ||| || ||| | Sbjct 465976 AAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTAGCTTTAACA 466035 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||||| |||||| || | ||| | |||||| ||||| | ||| || Sbjct 466036 TTATCAATGGTATCGGAACTCTCCACCTCCAACGTGATCGTTTTCCCAGTTAAAGTCTTC 466095 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 466096 ACGAAAATCTGCAT 466109 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| | || || ||| |||||||| || || | | Sbjct 503145 GACTCCTTTTGAATGTTGTAGTCAGCAAGCGTCCGACCATCCTCGAGCTGCTTGCCAGCA 503204 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || ||||||||||| || ||| || ||| | Sbjct 503205 AAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTAGCTTTAACA 503264 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||||| |||||| || | ||| | |||||| ||||| | ||| || Sbjct 503265 TTATCAATGGTATCGGAACTCTCCACCTCCAACGTGATCGTTTTCCCAGTTAAAGTCTTC 503324 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 503325 ACGAAAATCTGCAT 503338 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAAT 131969 ||| |||| ||| | ||||||| || ||||||||||| || ||| | || | | || Sbjct 497629 CAACACCAGATGGAGAGTTGACTCCTTCTGAATGTTGTAATCAGCT-AGAGTCCTCCCAT 497687 Query 131970 CTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTAT 132029 | |||||||| || || | | |||| || | ||| |||||||| || ||||||||||| | Sbjct 497688 CCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGT 497747 Query 132030 CGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCG 132089 | ||| || ||| | | || | ||||||| |||||| || | || | || Sbjct 497748 CTTGAATCTTAGCTTTAACATTATCAATGGTATCGGAACCCTCCACCTCCAAAGTGATCG 497807 Query 132090 TTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||| ||||| | ||| || | |||||||||||| Sbjct 497808 TTTTCCCAGTTAAAGTCTTCACGAAAATCTGCAT 497841 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAAT 131969 ||| |||| ||| | ||||||| || ||||||||||| || ||| | || | | || Sbjct 498085 CAACACCAGATGGAGAGTTGACTCCTTCTGAATGTTGTAATCAGCT-AGAGTCCTCCCAT 498143 Query 131970 CTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTAT 132029 | |||||||| || || | | |||| || | ||| |||||||| || ||||||||||| | Sbjct 498144 CCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGT 498203 Query 132030 CGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCG 132089 | ||| || ||| | | || | ||||||| |||||| || | || | || Sbjct 498204 CTTGAATCTTAGCTTTAACATTATCAATGGTATCGGAACCCTCCACCTCCAAAGTGATCG 498263 Query 132090 TTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||| ||||| | ||| || | |||||||||||| Sbjct 498264 TTTTCCCAGTTAAAGTCTTCACGAAAATCTGCAT 498297 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAAT 131969 ||| |||| ||| | ||||||| || ||||||||||| || ||| | || | | || Sbjct 498541 CAACACCAGATGGAGAGTTGACTCCTTCTGAATGTTGTAATCAGCT-AGAGTCCTCCCAT 498599 Query 131970 CTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTAT 132029 | |||||||| || || | | |||| || | ||| |||||||| || ||||||||||| | Sbjct 498600 CCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGT 498659 Query 132030 CGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCG 132089 | ||| || ||| | | || | ||||||| |||||| || | || | || Sbjct 498660 CTTGAATCTTAGCTTTAACATTATCAATGGTATCGGAACCCTCCACCTCCAAAGTGATCG 498719 Query 132090 TTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||| ||||| | ||| || | |||||||||||| Sbjct 498720 TTTTCCCAGTTAAAGTCTTCACGAAAATCTGCAT 498753 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||||||||||||||| | || || ||| |||||||| || || | | Sbjct 497197 GACTCCTTTTGAATGTTGTAGTCAGCAAGCGTGCGACCATCCTCGAGCTGCTTGCCAGCA 497256 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || ||||||||||| || ||| || ||| | Sbjct 497257 AAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTAGCTTTAACA 497316 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | |||||| || | ||| | |||||| ||||| | ||| || Sbjct 497317 TTATCAATGGTATCTGAACTCTCCACCTCCAACGTGATCGTTTTCCCAGTTAAAGTCTTC 497376 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 497377 ACGAAAATCTGCAT 497390 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| |||||||| |||||||| | || || ||| |||||||| || || | | Sbjct 459726 GACTCCTTTTGAATATTGTAGTCAGCAAGCGTGCGACCATCCTCGAGCTGCTTGCCAGCA 459785 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || ||||||||||| || ||| || ||| | Sbjct 459786 AAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTGAATCTTAGCTTTAACA 459845 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||||| |||||| || | || | |||||| ||||| | ||| || Sbjct 459846 TTATCAATGGTATCGGAACCCTCCACCTCCAAAGTGATCGTTTTCCCAGTTAAAGTCTTC 459905 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 459906 ACGAAAATCTGCAT 459919 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAAT 131969 ||| |||| ||| | | ||||| ||||||||||| || || ||| | || | || Sbjct 460163 CAACACCAGATGGAGAGTCGACTCCTTTTGAATGTTATAATCAGCT-AGAGTCCTGCCAT 460221 Query 131970 CTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTAT 132029 | |||||||| || || | | |||| || | ||| |||||||| || ||||||||||| | Sbjct 460222 CCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATGCCTTCTTTGT 460281 Query 132030 CGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCG 132089 | ||| || ||| | | || | ||||||| |||||| || | || | || Sbjct 460282 CTTGAATCTTAGCTTTAACATTATCAATGGTATCGGAACCCTCCACCTCCAAAGTGATCG 460341 Query 132090 TTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||| ||||| | ||| || | |||||||||||| Sbjct 460342 TTTTCCCAGTTAAAGTCTTCACGAAAATCTGCAT 460375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474217706214720