Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_027368.1 Length=33828 Score E Sequences producing significant alignments: (Bits) Value seq35681 104 5e-18 >seq35681 Length=3718 Score = 104 bits (114), Expect = 5e-18 Identities = 281/422 (67%), Gaps = 16/422 (4%) Strand=Plus/Minus Query 15250 TGCACATAAACAAGTTGTTGAAATCGGT-TTCGTTGTACTCTTCGCGCAGCTCGTCGATG 15308 ||||||| |||| | |||| || || | ||||| |||||| |||| || | | Sbjct 443 TGCACATGAACA-GCTGTTCGAAGCGCTCTTCGTCGTACTCCAGCTGCAGGCGCTCCAGG 385 Query 15309 TCGAACAGGTCACAGCCACCCTTGGCGGCATCTTCAATCGTGACCACATAACGCCACTGC 15368 |||||||||| ||||| || | ||| |||| |||||||| || | ||||||||| Sbjct 384 TCGAACAGGTTGCAGCCGCCGGCGATGGCGTCTTGAATCGTGATGACCTTGCGCCACTGC 325 Query 15369 TTATCCGGGCA-AAGGCGACCGCCATCGCGCAGTTCATCAAACGTTGGGAA----CTCGA 15423 |||||||| || ||| ||| ||| | | | | || | |||| | || Sbjct 324 CCGTCCGGGCACAACGCG-CCGGCATGGATCTGCGCTTC----GCTGGGCCACGGCCCGG 270 Query 15424 TGTTCTTGCGTCGTTCGCTGCCATCGCGCCATTTGTCCCCAGTCCAGAACGGGTAAGCGG 15483 ||||| | || | |||| | ||| | | || || |||||| |||| || || Sbjct 269 CCTTCTTTCCGCGCTTGCTG---TTGCGGAACTCCTCGCCGGTCCAGTACGGATATGCCT 213 Query 15484 GGTGCATTTTGGTTGAAGGGGTGGAAAAGTACGTCTTGCGCCACTTCTT-ATGCGTGGCC 15542 ||||| || | || ||||| ||||| ||| ||||||||| | ||||| |||| Sbjct 212 GGTGCGTTACCGCGCTGGGCGTGGAGAAGTAGGTCAGGCGCCACTTTTGCATGCGAGGCC 153 Query 15543 ATCGCTGAGGCGACTTTGTTCAGCTCGTCAAACTTGCCGATCCAGAAATACTCATCCACA 15602 ||||| ||| || | | ||||| | || ||| ||||||||| || || | Sbjct 152 ATCGCGCTGGCCACCGTCTGCAGCTTCTGGAAATTGGGGATCCAGAACACTTCGTCGATG 93 Query 15603 TACACATGGCCGTGGTAACTCTGCGCTGTTTTGCCATTGGTAGACAGGAAATGCAGCTCA 15662 || || ||||||||||| |||||||| || |||| || || || || || |||| || Sbjct 92 TAGACGTGGCCGTGGTAGCTCTGCGCCGTGTTGCTGTTCGTCGAGAGAAACCGCAGTTCC 33 Query 15663 GC 15664 || Sbjct 32 GC 31 Score = 95.1 bits (104), Expect = 3e-15 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 13813 TCGCCAACGGGTATCAGTTGAAT-GCCTTTCTCTTTCCCGTTCGGGATGTTCACAAACAT 13871 ||||| || || || | ||| || |||||| || ||| |||||||| || ||||| Sbjct 1864 TCGCCGACCGGAATTATTTGGATCGCCTTT-TCAGAGCCGCCTGGGATGTTGACGAACAT 1806 Query 13872 ACTGCGGAAGTTACCAA-TCCCTTTCGAGCTGGCGATCTTGTTTTTCAGTGCCTCTTCAT 13930 | |||||||||||| | |||||| | || | | |||| | |||||| |||||||| Sbjct 1805 AGAGCGGAAGTTACCGACTCCCTTACTTGCCG-CAATCTGCTGTTTCAGATTCTCTTCAT 1747 Query 13931 CTTCTTCACTCAAGTTCGGGTCGGTTGAGTAGAAAATAAACCCCATATGCGCACCGTTCA 13990 ||||||| ||| ||| |||| | | ||||| | | | || ||| || ||||| Sbjct 1746 CTTCTTCCGACAAATTCTCGTCGTTCGTATAGAACACATATCCGGCATGGGCGCCGTTAC 1687 Query 13991 GGTAATAACGGCGGCGAAACAGCGTCGC 14018 ||| || || ||||||||||| ||||| Sbjct 1686 TGTAGTAGCGCCGGCGAAACAGTGTCGC 1659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107612142396960