Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq938 163 2e-35 >seq938 Length=1173706 Score = 163 bits (180), Expect = 2e-35 Identities = 391/584 (67%), Gaps = 8/584 (1%) Strand=Plus/Minus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 |||| || ||| | || | | | || ||| |||||||||| || || | || || |||| Sbjct 1021315 TGTTCCCCATTGAGTACCCTCAGATTTGGGAAATGTACAAGAAGGCCGAAGCTTCCTTTT 1021256 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCAC 43826 ||||||| || || || |||||| | | ||| | || || ||| || | | | Sbjct 1021255 GGACAGCCGAGGAGGTAGATTTGTCGCAGGACCTCGCCCACTGGGAAGCCCTCACTGCCG 1021196 Query 43827 AAGAAAAACATTTTAT--ATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGT 43884 | || || ||||| || | | | ||| |||| || |||||||| ||| || || || Sbjct 1021195 ATGAGAAGCATTTCATCAAACAT--GTTCTGGCCTTCTTTGCTGCCTCCGATGGCATCGT 1021138 Query 43885 CAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944 || ||| | | | | |||| | ||||||| || | | || || || || Sbjct 1021137 TTTGGAGAATCTAGCTGGCAGGTTCATGAAAGAAGTCCAGGTTTCCGAGGCGCGCGCGTT 1021078 Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004 ||| || || || ||||| || || || || || || || ||||||||||||||| | || Sbjct 1021077 TTACGGATTCCAGATTGCAATCGAGAACATCCACTCCGAGATGTACAGTCTTCTGCTCGA 1021018 Query 44005 TACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC 44064 || |||||||||||| | ||||||| ||| | || || || || ||||| || Sbjct 1021017 AACATACATCAAAGATTCGGCCGAGAAGAGTCGCCTCTTCCGAGCTATTGACACAGTCCC 1020958 Query 44065 -TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTG 44123 |||| | | | || || | |||||||| ||||| | | || ||||||| Sbjct 1020957 ATGCG-TGGAGAAGAAGGCCAAGTGGGCCCTACGTTGGATCGACGGATCCGAATCTTTTG 1020899 Query 44124 GAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT-TTCAGGATCGTTTGCG 44182 || || || |||| ||||| || || || || ||||| | | ||| | | ||| Sbjct 1020898 CCGAGCGGCTACTCGCCTTTGCTTGCGTTGAGGGGATATTCTTCTCCGGGAGCTTCTGC- 1020840 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 |||||||||||||| |||||||| || | ||||| || || || ||||| || ||| || Sbjct 1020839 GCCATATTTTGGTTGAAGAAACGCGGCCTCATGCCAGGATTAACTTTTTCCAACGAGCTA 1020780 Query 44243 ATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286 || | || || || | || ||||| || || ||| |||| Sbjct 1020779 ATCTCGAGAGACGAGGGTCTGCACTGCGACTTCGCATGCCTGTT 1020736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395509915320760