Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq28025 104 2e-17 seq104699 95.1 1e-14 seq23032 93.3 4e-14 seq7521 93.3 4e-14 seq25458 89.7 4e-13 seq18673 89.7 4e-13 >seq28025 Length=485539 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || || || || || |||||||| || ||| ||| |||| |||||||| || || Sbjct 458299 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGT-GCGGCCGTCCTCGAGCTGCTTCCC 458241 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | ||||| || || || ||||| || | ||||| || || ||||||| || Sbjct 458240 GGCGAAGATGAGGCGTTGCTGGTCCGGTGGTATCCCCTCCTTGTCCTGGATCTTGGCCTT 458181 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | ||||| | || |||||| || || || || | ||| || || || || Sbjct 458180 GACGTTGTCGATGGTGTCCGAGGATTCAACCTCGAGGGTGATGGTTTTCCCTGTTAGGGT 458121 Query 27230 TTTCACAAAGATTTGCATA 27248 |||||||||||| |||||| Sbjct 458120 TTTCACAAAGATCTGCATA 458102 >seq104699 Length=868 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || | || || ||||| || | || || || || || || ||||||||| | Sbjct 614 CCACCACGGAGCCTCAGCACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCC 555 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || ||||||||||||| || |||||| | || | | ||| || || ||||| Sbjct 554 AAGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGCGGG 495 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||||| ||||| | || | ||||| | | |||||| Sbjct 494 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTATCGATGGTGTCGGAGCTTTCAACC 435 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | |||||||| || || || || ||||| ||||| Sbjct 434 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAACGAAGATCTGCAT 388 >seq23032 Length=1100947 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | ||||| || || || || || ||||| || ||||| || | || || Sbjct 133880 ACCAAATGAAGAGTAGATTCCTTCTGGATGTTATAGTCAGCCAATGTTCGGC-CATCCTC 133822 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| || |||||| | ||||| | ||||||||| || || | ||||| || || Sbjct 133821 CAGCTGCTTTCCGGCGAAGATGAGCCTCTGTTGATCTGGGGGAATCCCCTCCTTGTCCTG 133762 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| || ||| | | || | ||||| | | ||||| || |||||||| | || Sbjct 133761 GATTTTAGCTTTGACATTGTCGATGGTGTCGGAGCTCTCAACCTCAAGAGTTATGGTCTT 133702 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || |||||||||||||| Sbjct 133701 TCCGGTGAGGGTCTTGACAAAGATTTGCAT 133672 >seq7521 Length=567817 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || ||||||||| || | | || |||||||| Sbjct 337140 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGGCCGTCTTCG 337199 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | || | | ||| || || ||||| | || || || || | Sbjct 337200 AGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGCGGGATGCCTTCCTTGTCCTGG 337259 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| ||||| | || | ||||| | | |||||| || || || || | ||| Sbjct 337260 ATCTTGGCTTTCACATTATCGATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTG 337319 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| || || || || ||||| ||||| Sbjct 337320 CCCGTAAGGGTCTTAACGAAGATCTGCAT 337348 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| || | |||| || | || || || || || || ||||||||| Sbjct 337576 TGCCACCACGCAGACGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 337635 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| |||| |||||||| || |||||| | || || | || || || || | Sbjct 337636 CGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGTCTTTGCTGGTCTGGGG 337695 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || || ||| |||| | | | || | ||||||| | ||| | Sbjct 337696 GGATCCCTTCCTTGTCCTGAATTTTGGTTTTGACGTTGTCGATGGTGTCTGAGCTTTCCA 337755 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || || | ||||| |||| |||||||||||||| ||||| Sbjct 337756 CCTCTAGGGTGATGGTCTTGCCGGTCAAGGTTTTCACAAAGATCTGCAT 337804 >seq25458 Length=394795 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||||| ||||| || || ||||| || ||| ||| || | || || ||||| || || Sbjct 385135 GTAGACTCTTTCTGGATGTTGTAATCCGCTAGAGTT-CGTCCATCCTCCAGCTGCTTCCC 385077 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | || || | ||| ||||| || || | ||| |||||||| || || || Sbjct 385076 GGCGAAGATCAGCCTCTGCTGATCAGGAGGAATACCTTCTTTATCCTGAATTTTCGCCTT 385017 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | |||| ||||| | | ||||| || ||||| |||| ||||| || || || Sbjct 385016 CACATTGTCTATGGTGTCGGAGCTCTCAACCTCGAGAGTAATAGTCTTGCCGGTGAGGGT 384957 Query 27230 TTTCACAAAGATTTGCAT 27247 || |||||||||||||| Sbjct 384956 CTTAACAAAGATTTGCAT 384939 >seq18673 Length=525508 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||||| ||||| || |||||||| || ||| ||| || | || || ||||| || || Sbjct 460723 GTAGACTCTTTCTGGATATTGTAATCCGCTAGAGTT-CGTCCATCCTCCAGCTGCTTCCC 460781 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || || | ||| ||||| || || | ||| |||||||| || || || Sbjct 460782 GGCAAAGATCAGCCTCTGCTGATCAGGAGGAATACCTTCTTTATCCTGAATTTTCGCCTT 460841 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | |||| ||||| | | ||||| || ||||| |||| ||||| || || || Sbjct 460842 CACATTGTCTATGGTGTCGGAGCTCTCAACCTCGAGAGTAATAGTCTTGCCGGTGAGGGT 460901 Query 27230 TTTCACAAAGATTTGCAT 27247 || |||||||||||||| Sbjct 460902 CTTAACAAAGATTTGCAT 460919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422853771388224