Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq78578 104 6e-18 >seq78578 Length=1014 Score = 104 bits (114), Expect = 6e-18 Identities = 196/288 (68%), Gaps = 3/288 (1%) Strand=Plus/Minus Query 41172 AACAAAGTAGAAATCATTGGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAAGC 41231 |||||||| || | |||||| ||| ||| || ||| |||| |||| || | | Sbjct 534 AACAAAGTGATTCTCGTCGGCAACGCCGGCGGCGACCCGGAAGTCCGCTACACCCCGAAC 475 Query 41232 GGCGGCGCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCACC 41291 ||| ||| || | || ||| | | ||||| | ||||||||||| ||||| ||| Sbjct 474 GGCAACGCCGTAACGAACATAACCCTGGCCACCAGCGAAAGCTGGAAAGATAAGCAGACC 415 Query 41292 GGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAA 41351 ||| || || | || | || || ||||||||||| || ||||||| ||| | || ||| Sbjct 414 GGCCAGCAGCAGGAGCGTACCGAGTGGCACCGCGTAGTGTTCTTCGGCAAGATCGCCGAA 355 Query 41352 ATTGCTAGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCGAACG 41411 || || | || || ||||| ||||| ||| || | | | ||||||| || || || Sbjct 354 ATCGCGGGTGAGTATCTGCGAAAAGGGAGCCAGTGCTACGTCGAAGGCACTCTCCGCACC 295 Query 41412 CGTAAATGGCAGGACCAGGCTGGCGTTGATCGCTACACCACTGAAATC 41459 || | || ||| | | || || | ||||||||||| || ||| Sbjct 294 CGCGAGTG---GGAAAAAGACGGAGTGAAACGCTACACCACCGAGATC 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132574082974272