Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq938 141 1e-28 >seq938 Length=1173706 Score = 141 bits (156), Expect = 1e-28 Identities = 372/565 (66%), Gaps = 7/565 (1%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| ||||||||||| | ||||| || || || || || | ||||||||||| || Sbjct 1020756 GTGCAGACCCTCGTCTCTCGAGATTAGCTCGTTGGAAAAAGTTAATCCTGGCATGAGGCC 1020815 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 || ||||||||||| || || || || || || |||||||| |||||||| || || Sbjct 1020816 GCGTTTCTTCAACCAAAATATGGCGCAGAAGCTCCCGGAGAAGAATATCCCCTCAACGCA 1020875 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 130206 || || || | || ||||| ||||| || ||| | || | ||| | || Sbjct 1020876 AGCAAAGGCGAGTAGCCGCTCGGCAAAAGATTCGGA---TCCGTCGATCCAACGTAGGGC 1020932 Query 130207 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 130266 ||||| ||||| ||||| | || ||||| || | || ||| ||||| |||| Sbjct 1020933 CCACTTGGCCTTCTTCTCCACGCATGGGACTGTGTCAATAGCTCGGAAGAGGCGACTCTT 1020992 Query 130267 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT 130326 || | | |||||||||||| | || | || || | ||| |||| Sbjct 1020993 CTCGGCCGAATCTTTGATGTATGTTTCGAGCAGAAGACTGTACATCTCGGAGTGGA--TG 1021050 Query 130327 TTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCT 130384 ||| || ||| ||| | |||| || | |||||| ||| | ||| || || | Sbjct 1021051 TTCTCGATTGCAATCTGGAATCCGTAAAACGCGCGCGCCTCGGAAACCTGGACTTCTTTC 1021110 Query 130385 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGG 130444 || || | | |||||| ||||| || |||||||| ||||||| || ||||| Sbjct 1021111 ATGAACCTGCCAGCTAGATTCTCCAAAACGATGCCATCGGAGGCAGCAAAGAAGGCCAGA 1021170 Query 130445 ATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTCGTCAAGATCCTTC 130504 | || || ||||| | || |||| | | |||| | ||||| | | || |||| | Sbjct 1021171 ACATGTTTGATGAAATGCTTCTCATCGGCAGTGAGGGCTTCCCAGTGGGCGAGGTCCTGC 1021230 Query 130505 GAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTATAGAGTTCCCAG 130564 || | |||||||||||| || |||||| | || |||||||| || | |||||| Sbjct 1021231 GACAAATCTACCTCCTCGGCTGTCCAAAAGGAAGCTTCGGCCTTCTTGTACATTTCCCAA 1021290 Query 130565 AGGTGGGGATACTTCAGGGGGAACA 130589 | || || |||| | |||||||| Sbjct 1021291 ATCTGAGGGTACTCAATGGGGAACA 1021315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615329480269120