Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq17582 91.5 7e-14 >seq17582 Length=745959 Score = 91.5 bits (100), Expect = 7e-14 Identities = 161/229 (70%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 65083 TCGTCGTGTTCCAAACTGACCATTTGGCATTAATAA-ATTAATATTGTTTGAACCAATAA 65141 || |||||| || ||||||||||| ||| |||| || ||| || ||||| || | Sbjct 549648 TCCTCGTGTGCCGAACTGACCATTAGGC-TTAAGAAGATTTATGTTGTTGCTGCCTACGT 549706 Query 65142 AATTCTGAGCCATTCCGATAATTG--CTG-CATTTAAACTCGCTTCACCGTGATGATATC 65198 ||| ||||||||| || || || | ||| || | |||| ||| || ||||| || Sbjct 549707 AATCCTGAGCCATACCAATGATGGTACTGGCA---AGACTCTGTTCGCCATGATGGTAAG 549763 Query 65199 CTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCT 65258 |||||||||| || ||||| ||| ||||| | ||||||| |||| | | || || Sbjct 549764 CTGAATGTTCGGATACATAACCAGAGAATTGCGAAACTTTTGCTTCCTTGATGAAGTTTC 549823 Query 65259 TTTTAAATGCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATC 65307 | ||||| | | | | | ||| || ||| || | |||||||||||| Sbjct 549824 TCTTAAAAGAACAGAAAAGTATCTTTCGTTGACCAGGTTTCAATCCATC 549872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234526027642800