Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq938 136 4e-27 seq33853 89.7 6e-13 >seq938 Length=1173706 Score = 136 bits (150), Expect = 4e-27 Identities = 326/483 (67%), Gaps = 14/483 (3%) Strand=Plus/Plus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || ||||| | | || ||||| || || || |||||||||||||| ||||| ||| Sbjct 1020784 TCGTTGGAAAAAGTTAATCCTGGCATGAGGCCGCGTTTCTTCAACCAAAATATGGCGCAG 1020843 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 ||| || |||||| || || || || || |||||||||| || || | || || Sbjct 1020844 AAGCTCCCGGAGAAGAATATCCCCTCAACGCAAGCAAAGGCGAGTAGCCGCTCGGCAAAA 1020903 Query 74910 GGTGCATCGGA--AGTC-ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GG 74965 | | ||||| ||| |||||| | ||||| | || ||| | | |||| || Sbjct 1020904 GAT---TCGGATCCGTCGATCCAACGTAGGGCCCACTTGGC-CTTCTTCTCCACGCATGG 1020959 Query 74966 GACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTC 75025 ||| || || || ||| ||||||||| |||||| | | ||| |||| | | || Sbjct 1020960 GACTGTGTCAATAGCTCGGAAGAGGCGACTCTTCTCGGCCGAATCTTTGATGTATGTTTC 1021019 Query 75026 AATCATAAGTGAGTACGTCTCCGAATGAATCGACTCG-TTGAACGACTGGTACGCGTAGA 75084 | || ||| |||| |||| || || || |||| ||| | |||| | |||| | Sbjct 1021020 GAGCAGAAGACTGTACATCTCGGAGTGGATGTTCTCGATTGCA-ATCTGGAATCCGTAAA 1021078 Query 75085 AAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTCCAT 75142 | | |||||||| | || ||| || || || |||| || | | |||||||| Sbjct 1021079 ACGCGCGCGCCTCGGAAACCTGGACTTCTTTCATGAACCTGCCA--GCTAGATTCTCCAA 1021136 Query 75143 GACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATC 75202 |||||||| || ||||| || || || ||||| || |||||| || || |||||| Sbjct 1021137 AACGATGCCATCGGAGGCAGCAAAGAAGGCCAGAACATGTTTGATGAAATGCTTCTCATC 1021196 Query 75203 GTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCA 75262 | ||||||| ||||| | |||||| || |||||| | ||||||| | ||||| Sbjct 1021197 GGCAGTGAGGGCTTCCCAGTGGGCGAGGTCCTGCGACAAATCTACCTCCTCGGCTGTCCA 1021256 Query 75263 GAA 75265 || Sbjct 1021257 AAA 1021259 >seq33853 Length=384389 Score = 89.7 bits (98), Expect = 6e-13 Identities = 143/202 (71%), Gaps = 5/202 (2%) Strand=Plus/Plus Query 55739 TACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGT 55798 ||||| || ||||||||| | || |||||| ||||| ||| || |||| || || Sbjct 88746 TACCGCACCGTGTGGGAGCTGCCGCAGAAGGCGCTGATCGACCTGGCAGCTGCGCGCGGC 88805 Query 55799 GCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC-TTCACTGGCCAA 55857 || |||||||||||| |||||| |||||| | |||||||| || || || |||| | Sbjct 88806 GCCTACATCGACCAGAGCCAGTCGCTGAACCTGTTCATGGAAAACCCGAACATCGGCC-A 88864 Query 55858 GTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCT 55917 | | ||| ||| || | |||| |||||| || ||||||| | |||||| || Sbjct 88865 GCTTTCCTCCATGTACATGTACGCATGGAAGGCAGGCGTCAAGAC---CACGTACTACCT 88921 Query 55918 GCGGACCCGCGCCAAGGCCAAG 55939 ||| | ||| || | ||||| Sbjct 88922 GCGCTCGCGCCCCGCGACCAAG 88943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544467935969600