Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq78578 242 1e-59 seq33768 134 5e-27 seq33802 89.7 2e-13 >seq78578 Length=1014 Score = 242 bits (268), Expect = 1e-59 Identities = 237/305 (78%), Gaps = 3/305 (1%) Strand=Plus/Minus Query 7277 GAGGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACA 7336 |||| || |||||||| ||||| || || |||| ||| || ||||||||| |||||||| Sbjct 542 GAGGCGTCAACAAAGTGATTCTCGTCGGCAACGCCGGCGGCGACCCGGAAGTCCGCTACA 483 Query 7337 TGCCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACA 7396 || |||||||| || || || ||||| ||||| ||||||||||| |||||||| || | Sbjct 482 CCCCGAACGGCAACGCCGTAACGAACATAACCCTGGCCACCAGCGAAAGCTGGAAAGATA 423 Query 7397 AGCAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCC 7456 |||||||||||||||| ||||| || |||||| |||||||| ||||||||||| Sbjct 422 AGCAGACCGGCCAGCAGCAGGAGCGTACCGAGTGGCACCGCGTAGTGTTCTTCGGCAAGA 363 Query 7457 TGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCC 7516 | || || ||||| || ||||| ||||| || || |||| |||||||||||||| | Sbjct 362 TCGCCGAAATCGCGGGTGAGTATCTGCGAAAAGGGAGCCAGTGCTACGTCGAAGGCACTC 303 Query 7517 TGCGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCG 7576 | ||||||||| |||| || | ||||| | | || |||||||||||| | ||| Sbjct 302 TCCGCACCCGCGAGTG---GGAAAAAGACGGAGTGAAACGCTACACCACCGAGATCGTCG 246 Query 7577 TCGAC 7581 ||||| Sbjct 245 TCGAC 241 >seq33768 Length=156001 Score = 134 bits (148), Expect = 5e-27 Identities = 226/325 (70%), Gaps = 9/325 (3%) Strand=Plus/Plus Query 7285 AACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCCAAC 7344 ||||| ||||| | || || ||| | || | || |||||||||||||||| || | Sbjct 53132 AACAAGGTCATCATCGTCGGCAACCTAGGCGCCGATCCGGAAACCCGCTACACCGGCAGC 53191 Query 7345 GGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAGACC 7404 |||| || | |||| | | | ||||||| || |||| |||||||||| | Sbjct 53192 GGCACCGCCATCACCAGCCTGCGCATCGCCACTTCGGAACAGTGGACCGACAAGCAGAGC 53251 Query 7405 GGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTGGCGGAG 7464 ||| ||| ||||| ||| |||| | ||||||||| | | ||||| ||||| ||| Sbjct 53252 GGCGAGCGCCAGGAGCGCACCGAATGGCACCGCGTGAAGCTGTTCGGCAAGCTGGCCGAG 53311 Query 7465 ATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTGCGCACC 7524 |||||||||||||||||| || || ||||||||| |||| || ||||||||| Sbjct 53312 ATCGCCGGCGAGTACCTGAAGAAAGGCCGGCAGGTCTACATCGAGGGTTCGCTGCGCACC 53371 Query 7525 CGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCGTCGACATG 7584 ||||| | |||||||| || || ||| ||||||| ||| ||| || Sbjct 53372 GACAAGTACACCGACAAGGACGGCATCGAGCGCTACTCCACCGA---CATCATCGCCA-- 53426 Query 7585 CACGGACAGATGCAGATGCTTGGCG 7609 ||| ||||||||||||| |||| Sbjct 53427 -ACG---AGATGCAGATGCTGGGCG 53447 >seq33802 Length=298597 Score = 89.7 bits (98), Expect = 2e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 53678 TCATCGCGGTACACGAACATGACGATGTCGGCGTCTTGCTCAATGGCGCCGGACTCGCGC 53737 || |||||||| | |||||||| | ||||||||| ||||| |||||||| ||||||||| Sbjct 56317 TCGTCGCGGTAGATGAACATGATCACGTCGGCGTCCTGCTCGATGGCGCCCGACTCGCGC 56376 Query 53738 AGGTCGCTGAGGACCGGACGCTTGTCGGGGCG 53769 |||||| | | ||| |||||||||| ||| Sbjct 56377 AGGTCGGACATCATCGGGCGCTTGTCGGCGCG 56408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193889755586544