Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_028770.1 Length=59878 Score E Sequences producing significant alignments: (Bits) Value seq33810 98.7 4e-16 >seq33810 Length=274286 Score = 98.7 bits (108), Expect = 4e-16 Identities = 220/324 (68%), Gaps = 10/324 (3%) Strand=Plus/Minus Query 5932 CGGCCCGCCGTTGAGGCAGATGAGAAGCTCGGCTTCCTGCCCGGCACTGTGGACGAGAAG 5991 || || || || ||||| | |||||||| ||||||||||||||| || | ||||| Sbjct 273701 CGCCCTGCGGTGGAGGCCGGCGAGAAGCTGGGCTTCCTGCCCGGCGACCTGACCCAGAAG 273642 Query 5992 ATGGCACCCTACCTCACCCCGATGCTGGACGCGGTGATCGACCTGGTCGG---CCCGACG 6048 | | |||||||| |||| || |||||| || ||| || |||| | || | Sbjct 273641 GTCGACCCCTACCTGCGCCCGCTGTACGACGCGCTGTACGAGATGCTCGGCTTCGAGAAG 273582 Query 6049 ATGACGAAGCGCCTCCTCGAGTCGC-GCCAGCTGGAGGTCGCCCCGCTGGCCTACATGCG 6107 || | ||| || ||||| ||| | | | ||| |||| ||||| || |||||||| Sbjct 273581 GTGGCCAAG---CTGATCGAG-CGCAACGTGATCGAGATCGCACCGCTCGCATACATGCG 273526 Query 6108 AGGCCGGACGTTCAACGACACGTACATCGTCGCTGACGAGATGCAGAACGCCACC-CCGC 6166 ||||| || |||||||| | ||| | || |||||| ||||||| ||||| || Sbjct 273525 CGGCCGCACCCTCAACGACTCCTACGTGATCCTCGACGAGGCGCAGAACACCACCGTCGA 273466 Query 6167 GCCAGACCGCGCTGCTGGTGACCCGCCTGGGCTTCGGGACGAAGGCCGTCCTGAACGGTG 6226 | |||| | || | | |||||| | |||||||| || ||| || | | ||| | Sbjct 273465 G-CAGATGAAGATGTTCCTCACCCGCATCGGCTTCGGCTCGGTGGCGGTGATCACCGGCG 273407 Query 6227 ACCCGGCCCAGTGCGACCTGCCGC 6250 || |||| ||||||||||| Sbjct 273406 ACGTCAGCCAGGTCGACCTGCCGC 273383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190574448092160