Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq33774 374 4e-99 >seq33774 Length=113159 Score = 374 bits (414), Expect = 4e-99 Identities = 595/847 (70%), Gaps = 15/847 (2%) Strand=Plus/Plus Query 64065 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 64124 ||||||| || | | |||||| ||| |||||| | || || ||| | ||||| | Sbjct 108113 CCACCGGTTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGCGGCCTGCCGCGCGGCCGCG 108172 Query 64125 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 64184 || | || ||||||||||| ||||| || || ||| | || ||| || || | | | | Sbjct 108173 TGATCGAGATCTACGGCCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGTGATCG 108232 Query 64185 CCAA-TGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGAC 64243 |||| ||| |||||| ||| |||| ||||| | | ||||||| |||||| | || || Sbjct 108233 CCAACTGC-CAGAAGAACGGCGGCACTGCCGCGTTCGTCGACGCCGAGCACGCGCTCGAT 108291 Query 64244 CCTGAGTA---CGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCG 64300 || || ||||||| || || ||| || | ||| |||| |||| ||||| Sbjct 108292 CCCACCTATGCCGCCAAG---CTGGGCGTGAACGTGGACGACCTGCTGGTCTCCCAGCCC 108348 Query 64301 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCC 64360 ||||| ||||| ||||| ||||| |||| ||| | || || || |||| | || Sbjct 108349 GACACCGGCGAACAGGCGCTGGAAATCGCCGACATGCTGGTGCGCTCCGGCGCGGTGGAT 108408 Query 64361 ATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATC 64420 | || || || ||||| || || || || ||| ||||| |||||||||| || Sbjct 108409 GTGGTGGTGGTCGACTCGGTCGCCGCATTGACCCCGAAGGCCGAAATCGAAGGCGAGATG 108468 Query 64421 GGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACC 64480 || || ||||| ||||||||||| ||||| ||| ||||| |||||||||||||| Sbjct 108469 GGCGATTCCCACGTGGGCCTGCACGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACC 108528 Query 64481 GGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 64540 | || |||| | | ||| ||| | ||| |||||||| | ||| ||||||| Sbjct 108529 GCCAACATCAAAAAGTCGAACTGCCTGGTGATCTTCATCAACCAGATCCGCATGAAGATC 108588 Query 64541 GGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTAC 64600 ||| || | | |||| |||||||||||| |||||||| || ||| ||||||| Sbjct 108589 GGCGTGATGTTCGGCAGCCC---CGAGACCACCACTGGCGGCAATGCGCTGAAGTTCTAC 108645 Query 64601 GCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 64660 ||||| || |||||||| |||| ||||||| | | |||| | |||||||||| || Sbjct 108646 GCCTCGGTGCGCATGGACATCCGCCGCATCGGTGCGGTGAAGAAGGGCGATGAGGTGATC 108705 Query 64661 GGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCC 64720 ||| ||||| || ||||| || ||||||||| |||| |||||| ||| | ||| Sbjct 108706 GGCTCGGAAACCCGCGTCAAGGTGGTGAAGAACAAGGTGGCTCCGCCGTTTCGCCAGGCC 108765 Query 64721 GAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCC 64780 |||||| || | ||||| |||||| |||||| || | ||| || |||| |||| | Sbjct 108766 GAGTTCGAGATCCTCTACGGCGAGGGCTCCTCGCGCGAAGGCGAGATCATCGAACTGGGC 108825 Query 64781 GTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACG-- 64838 ||| ||||| |||| | | ||||| |||||||||| || ||| || | || || Sbjct 108826 GTGGCGCAGAACCTGATCGACAAGTCCGGCGCCTGGTACAGCTACAAGGGC--GACCGTA 108883 Query 64839 TCGCCCAGGGCAAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGACATCACCGACT 64898 ||| |||||||||| || | ||||| ||||||| |||||||| |||| || || Sbjct 108884 TCGGCCAGGGCAAGGAAAACGTGCGCCAGTTCCTCAAGGACAACCCGGCCATCGCCAACG 108943 Query 64899 CCATCGA 64905 ||||| Sbjct 108944 AGATCGA 108950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231663313469672