Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq33775 123 9e-24 >seq33775 Length=276061 Score = 123 bits (136), Expect = 9e-24 Identities = 133/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 4907 CTGTGGGACGCGGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCATC 4966 ||||||||| | ||||| |||||| | |||| || ||||||||| || | | ||| Sbjct 192378 CTGTGGGACATGATCATGGTCTCCACGTACGACTACGCGGAGCCGGGCTTCATCCTGATC 192437 Query 4967 GACCGCATCAACGAGATGAACAACCTCCACTACTGCGAGACCATCGCGGCGACCAACCCG 5026 ||| ||||||||||||||||| | | |||||| |||| || ||||||||| Sbjct 192438 GACAAGGTCAACGAGATGAACAACAACTGGTGGTGCGAGCACATCCGCGCCACCAACCCG 192497 Query 5027 TGCGGCGAGCAGCCGCTGCCACCGTTCGGCGCCTGCCTGCTCGGCTCCTTCAACCT 5082 ||||| ||||| || || || || | |||| |||||||||||||||| ||||||| Sbjct 192498 TGCGGAGAGCAACCACTTCCGCCCTACGGCTCCTGCCTGCTCGGCTCGGTCAACCT 192553 Score = 87.8 bits (96), Expect = 7e-13 Identities = 190/278 (68%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 4562 GGCGGCGGCATCGGCTACGACTTCTCCACCCTGCGCCCCAAGGGCGACCTCATCGTCAAG 4621 ||| |||||||||||||||| |||||||| ||||| || |||| | | | ||| | Sbjct 191922 GGCTGCGGCATCGGCTACGAGTTCTCCACGCTGCGTCCGCGCGGCGCCTACGT-GTCGGG 191980 Query 4622 CTGCAGTCCCG--CAGCTCCGGCCCCATCTCCTTCATGGAGATTTTCGACGCAGTCTGCC 4679 | || | | || || | |||||| | ||||||||||| || | |||| | ||| Sbjct 191981 C-GCCGGCGCGTACACCAGCGGCCCGCTGTCCTTCATGGACATCTACGACAAGATGTGCT 192039 Query 4680 GCTGCACGTCCTCGTCCGGCCACCGGCGTGGCGCGCAGATGGGCGTCCTGCG-CATCGAC 4738 | | ||| || |||| ||| |||||||||||||||||| | | || | || | Sbjct 192040 TCACCGTGTCGTCCGCCGGTGGCCGCCGTGGCGCGCAGATGGGC-ACGTTCGACGTCAGC 192098 Query 4739 CACCCCGACATCTTCGACTTCGTCCGCGCCAAGCAGAACGAGACCTTCCTGCGCGGCTTC 4798 || |||||| | || ||| |||||||||||| | || | ||||||| ||| Sbjct 192099 CATCCCGACGTGAAGGAATTCATCCGCGCCAAGCGCGAAGACGGCCGCCTGCGCCAGTTC 192158 Query 4799 AACATCTCCATCGCCGTCACGGACGAGTTCATGCGGGC 4836 ||| || | | ||||| |||| ||||||| ||| Sbjct 192159 AACCTCAGCCTGCTGGTCACCGACGGCTTCATGCAGGC 192196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186622193912976