Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq12962 233 6e-57 >seq12962 Length=520891 Score = 233 bits (258), Expect = 6e-57 Identities = 1041/1622 (64%), Gaps = 104/1622 (6%) Strand=Plus/Plus Query 37752 GCCCTCGCCCACGTTCTTCACGGCGGTCAGCCCGAAGCGGATCTCCCGCTCCCCGTTCGG 37811 ||||| ||||||| ||| | ||| || ||| ||||||| ||| | | | ||| Sbjct 87586 GCCCTGGCCCACGCCCTTGATCGCGCCGAGACCGTAGCGGATTTCCTTCGGCTTGGTCGC 87645 Query 37812 GGTGAAGGAGGAGTTCGAGACCGACACGTCGGGCGGCAGGACCCGAAGGCCCATGCGCCT 37871 ||| | ||| |||| | |||||| |||||||| || ||||| || ||||| Sbjct 87646 CACGAACATGAAGTCCGAGGCGTTCACGTCCGGCGGCAGCACGGTGAGGCCGAT-CGCCT 87704 Query 37872 -GCACTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCGTCGCCCACCGAGGTGAGCACGG 37930 | ||||| ||| | | || || ||||| ||| ||| |||| | || | | Sbjct 87705 TGGACTCGTCGATGAAGGTCACCGCCTTGTCGGTGTTGTCCATGTCCGACGAGATCGTCG 87764 Query 37931 CCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTC 37990 | |||||| ||||||| |||||||||| |||||| | || || |||||| || || Sbjct 87765 CGGCCATGAACTCGGCGGGGTAGTGCGCCTTCAGCCAGGCGGTCTGGTAGGAGACCAGCG 87824 Query 37991 CGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCC 38050 |||| || || | ||||| |||||||||| |||| |||||||| | | || ||| Sbjct 87825 CGTAGGCGGCGGCGTGCGACTTGTTGAAGCCGTAGCCGGCGAACTTCTCCATCAGGTCGA 87884 Query 38051 ACAC--CGCCCGGATGGCAGCCTCCGAGTAGCCTCGCTCGCTCGCCCCCTTCTGGAAGTT 38108 | | || | | | || || | ||| | || | || ||| |||| |||| || Sbjct 87885 AGATTTCGTCGGCCTTGCCGCTGCTGAGCC-CGTCCTTGGC-CGCGCCCTCGCGGAACTT 87942 Query 38109 CACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTC 38168 || ||||| |||| | ||||| |||||||||||||| ||||| || || ||||| Sbjct 87943 GGCGCGTTCCTTCGCCATCTCCTCGACTTTCTTCTTGCCCATCGCGCGGCGCAGCAGGTC 88002 Query 38169 GGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTA 38228 ||| ||||| ||||| ||| | | |||||||||| || | ||||||||||||||| Sbjct 88003 GGCGCCGCCGAGCGTGTAGCCGCCGACGATCTGCGCCATCTGCATCACCTGCTCCTGGTA 88062 Query 38229 GATGATGAGCCCGAAGGTCGGGTCCAGGATC---TCGGCCAGCGGCTCCTCCACCTCGGG 38285 || |||| ||| ||||| | ||||||| ||| | |||| || ||| Sbjct 88063 GACCATGATGCCGTAGGTCTCTTTCAGGATCGGTTCGACGCGCGGGTC---------GGG 88113 Query 38286 GTGGATCGGCGTGATCTCCTGCTGACCGTTCTTGCGGAGGGCGTAGTTCGTGTGCGAGCC 38345 || | | | |||| | |||| |||||| || |||| | || | Sbjct 88114 GTACACC------ACTTCCTCGCGGCCGTGCTTGCGCGCCACGAAGTTGG-----GAATC 88162 Query 38346 CATGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAACTGGTC 38405 | | ||||||| || || |||||||||||| | | || || ||| ||||| |||| Sbjct 88163 -AGGTCCATCGGGCCGGGGCGGTACAGCGCGCCCAGCGCGATGAGGTCGTCGAAGCGGTC 88221 Query 38406 CGGCTTCAGCAGGCGA-----AGCAGGGAGCGCATCGCGCCGCCG--TCGAGCTGGAAGA 38458 ||||| |||| |||| | |||| || ||| | |||| |||||||| Sbjct 88222 GGGCTT-----GGCGTCCTTCAGCATGCGCTGCAT-GC-CCGAGGATTCGAACTGGAAGA 88274 Query 38459 CCGAGAGGGTGTCGCCCCTGGCCAGCAGCTCG---TAGGTTGCCGGGTCGTCCAGCGGGA 38515 || || ||| | || |||| | | |||| ||||| || | |||||||||||| | Sbjct 88275 TCGCGACGGTCTTCGCCTTGGCGAAGATCTCGGCGTAGGTGGCGGCGTCGTCCAGCGGCA 88334 Query 38516 TGTTCTCGATGTCGACGTGCTCACCACGGTT------GCGGCGGATGTTC-TCGACCGCG 38568 || ||||| | |||| | | | | |||||| ||| ||| | | Sbjct 88335 GCTTGGAAATGTCCAGCGGCTCCTCGCCGCTCTGCGCGCGGCGCGCGTTGATCGCCTTCA 88394 Query 38569 TCGCCCA-----TGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCA 38623 |||||| |||| || || | || || ||||||||||| | ||||| |||||| | Sbjct 88395 CCGCCCAATCGATGATGGTCAGCGTGCGCAGGCCGAGGAAGTCGAACTTCACCAGGCCGA 88454 Query 38624 GGGCCTCGCAGCTCGGG-TAGTCGAACTGCGTGATCGTCACGCCGTCCGCAGGC--CGCA 38680 || || || ||| | |||| |||| |||| | ||||| |||| ||| |||| Sbjct 88455 CCGCTTC-CACGTCGTCCTTGTCGTACTGGGTGACCACGCCGCCG-CCGCCGGCTTCGCA 88512 Query 38681 CCCACGTAGGGATGTGGTCGACCAGCGGCTCGTCAGACATGATCACACCGGCTGCGTGCA 38740 || || || ||| ||||| || | || | ||| ||| | |||||| Sbjct 88513 GT-ACAGCGGCGCGTATTCGGTCAGCGTCTGCTGGCCGATCACCACGCCGCCGGCGTGCT 88571 Query 38741 CGCCCATCTGCCGGACGAGTCCTTCGAGGCCACGCGCGAGGTCGATGACCTCCTTCGC-- 38798 ||| | | ||| ||| | ||| || ||||||||||||| | | ||| Sbjct 88572 TGCCGACGTTGCGGGTGAGGCTTTCCAGCTTCAGCGCGAGGTCGATCAGCGGGCGCGCCT 88631 Query 38799 -GTCCTTGTCGTTCTCGTACAGCGCCCGGATCTCGCCCGCCTCGTCGTAGCG--CGGGTG 38855 ||||| ||| | || ||||||| | | || || || | || ||| ||||| Sbjct 88632 CGTCCTCGTCCTGCTGGTACAGCTCGCAGAATTC------CTTGACGACGCGTTCGGGTT 88685 Query 38856 C----TCCGGGTTGGTGATGCCCTCCAGGGGCATCG-ACGCGCCCATCACGTCGGCCGGG 38910 | | || || | ||| |||| | | ||| || | | | |||| ||| Sbjct 88686 CCTTCTTCGATTTCTCGGTGCGGCCCAGCG-CGTCGGACAGGG---TGAGGTCGAGCGGT 88741 Query 38911 TACGCCTTGGTCAGCTT------CTCGCCGACCTGGA---AGGGCTTGTCCAGCACGCGG 38961 || | | ||||||| || | | ||| | || | || | ||||||||| Sbjct 88742 CGCGGCGGGATCAGCTTGGCGATCTTGTCCACCGCGCCGTAGCCCATGCCGAGCACGCGG 88801 Query 38962 GCCGCGTC---CTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCGCGATCTGTGCG 39018 | | || | || ||| || |||| ||| ||||| || |||||| | Sbjct 88802 CCGGAATCGCGCAGCACCGCCTTCGCCGCC---ATCGAGCCGTAGGTGATGATCTGGCTG 88858 Query 39019 ACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTCA 39078 || | ||| | ||||||||| | ||||| |||||| ||| | ||||| | || Sbjct 88859 ACGTGGTCGCGGCCGTACTTGCGCGCCACGTAGTCGATCACCTCGTCGCGGCG--GTCCA 88916 Query 39079 TC--GAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGA 39136 | |||||||||||| | ||| ||||| || || || || || || ||||| ||||||| Sbjct 88917 TGCAGAAGTCGATGTCGAAGTCCGGCATCGACACGCGTTCGGGATTGAGGAAGCGCTCGA 88976 Query 39137 AGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCG 39196 | | || | | | ||||| |||||||||||| || | |||| |||||| Sbjct 88977 ACAGCAGGTTGAACTGCAGCGGGTCGAGGTCGGTGATCTTCAGCACCCACGCCACCAGCG 89036 Query 39197 AGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGA 39256 | || || | |||||||| || ||||| ||| | |||||||| ||| ||||| || Sbjct 89037 AACCCGCGCCCGAGCCGCGGCCCGGGCCCACCGGGATGCCGTTCTGCTTGCCCCAGTTGA 89096 Query 39257 TGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCT 39316 ||||||| || |||| |||||||| ||||| ||||||| | |||| | ||| | || Sbjct 89097 TGAAGTCCGCCACGATCAGGAAGTAGCCGGGGAAGCCCATCTTGATGATGACGTCCAGCT 89156 Query 39317 CG 39318 || Sbjct 89157 CG 89158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158953229925264