Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq33775 114 5e-21 >seq33775 Length=276061 Score = 114 bits (126), Expect = 5e-21 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 4342 CTGTGGGACGCTGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCATC 4401 ||||||||| ||||| |||||| | |||| || ||||||||| || | | ||| Sbjct 192378 CTGTGGGACATGATCATGGTCTCCACGTACGACTACGCGGAGCCGGGCTTCATCCTGATC 192437 Query 4402 GACACCATCAACCGCATGAACAATCTCTGGTACTGCGAGGAGATTGCGGCCACCAACCCG 4461 |||| ||||| |||||||| ||||| |||||| | || |||||||||||| Sbjct 192438 GACAAGGTCAACGAGATGAACAACAACTGGTGGTGCGAGCACATCCGCGCCACCAACCCG 192497 Query 4462 TGCGGCGAGCAGCCGCTGCCTCCGTTCGGCGCCTGCCTGCTTGGCTCCTTCAACCT 4517 ||||| ||||| || || || || | |||| |||||||||| ||||| ||||||| Sbjct 192498 TGCGGAGAGCAACCACTTCCGCCCTACGGCTCCTGCCTGCTCGGCTCGGTCAACCT 192553 Score = 89.7 bits (98), Expect = 2e-13 Identities = 189/276 (68%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 3997 GGCGGCGGCATCGGCTACGACTTCTCCACCCTGCGCCCCAAGGGCGACCTGATCGTCAAG 4056 ||| |||||||||||||||| |||||||| ||||| || |||| ||| ||| | Sbjct 191922 GGCTGCGGCATCGGCTACGAGTTCTCCACGCTGCGTCCGCGCGGCG-CCTACGTGTCGGG 191980 Query 4057 CTGCAGTCCCG--CAGCTCCGGCCCCATCTCCTTCATGGAGATTTTCGACGCGGTCTGCC 4114 | || | | || || | |||||| | ||||||||||| || | |||| | | ||| Sbjct 191981 C-GCCGGCGCGTACACCAGCGGCCCGCTGTCCTTCATGGACATCTACGACAAGATGTGCT 192039 Query 4115 GCTGCACGTCCTCGTCCGGCCACCGCCGTGGCGCCCAGATGGGCGTCATGCG-CATCGAC 4173 | | ||| || |||| |||||||||||| ||||||||| | | || | || | Sbjct 192040 TCACCGTGTCGTCCGCCGGTGGCCGCCGTGGCGCGCAGATGGGC-ACGTTCGACGTCAGC 192098 Query 4174 CACCCCGACATCTTCGAGTTCATCCACGCCAAGCAGAACGAGCACTTCCTGCGCGGCTTC 4233 || |||||| | || ||||||| |||||||| | || | ||||||| ||| Sbjct 192099 CATCCCGACGTGAAGGAATTCATCCGCGCCAAGCGCGAAGACGGCCGCCTGCGCCAGTTC 192158 Query 4234 AATATCTCCATCGCCGTCACCGACGAGTTCATGGAG 4269 || || | | |||||||||| |||||| || Sbjct 192159 AACCTCAGCCTGCTGGTCACCGACGGCTTCATGCAG 192194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175383269659680