Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq33802 93.3 8e-14 seq33775 89.7 1e-12 >seq33802 Length=298597 Score = 93.3 bits (102), Expect = 8e-14 Identities = 204/298 (68%), Gaps = 6/298 (2%) Strand=Plus/Minus Query 234549 CATCATCCCACCGCACGGCTTTATCCTGACTCGTTCTGTGGAGTACGTCCGTATTCCGCG 234608 ||||||||| || || ||| ||| | || | |||||||| |||| |||||||| Sbjct 234126 CATCATCCCGCCCAACTCCTTCGCGCTGGCGCGCACGGTGGAGTATTTCCGCATTCCGCG 234067 Query 234609 TAACGTACTGGCACTGTGCATCGGTAAGTCGAC-TATCGCCCGTGTGGGCATCAACTGTC 234667 |||| |||| ||||| | || ||| || ||| || || ||||||| | ||| Sbjct 234066 CGACGTGCTGGTGGTGTGCCTGGGCAAGAGCACCTAT-GCGCGCTGCGGCATCATC-GTC 234009 Query 234668 TGTG-CACTCCGATCGAACCGGAATGGGAAGGCCACATCACCTTCGAATTCCACAACACT 234726 | ||| ||| | || |||||||||||||||||| | || | |||||| |||||| Sbjct 234008 AACGTCACCCCGCTGGAGCCGGAATGGGAAGGCCACGTGACGCTGGAATTCTCCAACAC- 233950 Query 234727 CTCG-ATCAACCGAACACCTTCTATGCCAACGAAGGTGTACTGCAACTGGTCTTCATCGA 234785 | || | ||| | |||| ||||||||||| || ||| || | ||| |||| Sbjct 233949 CACGCCGCTGCCGGCGAAGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCTTCGA 233890 Query 234786 AGGCGATGAGCCGTGCATTACTTCGTATGCCGATCGTGGCGGTAAGTACCAGGGTCAG 234843 | ||| ||||| ||| || || ||||| ||||| ||||||||||| ||| Sbjct 233889 ATCCGACGAGCCCTGCGAGACCAGCTACCGGGATCGCGGCGGCAAGTACCAGGGCCAG 233832 >seq33775 Length=276061 Score = 89.7 bits (98), Expect = 1e-12 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 294864 TGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTACCAGC 294923 ||||| ||| ||| ||||||||| ||||||||||||||||| ||||||||||||||| | Sbjct 52295 TGCCGGCAGCAGGAATCGAACCCG-CGACCTACTGATTACAAATCAGTTGCTCTACCAAC 52353 Query 294924 TGAGCTATAACGGC 294937 |||||||| |||| Sbjct 52354 TGAGCTATGCCGGC 52367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984241853116056