Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq33774 370 5e-98 >seq33774 Length=113159 Score = 370 bits (410), Expect = 5e-98 Identities = 592/846 (70%), Gaps = 13/846 (2%) Strand=Plus/Plus Query 66094 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66153 ||||||| || | | |||||| ||| |||||| | || || ||| | ||||| | Sbjct 108113 CCACCGGTTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGCGGCCTGCCGCGCGGCCGCG 108172 Query 66154 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66213 || | || ||||||||||| ||||| || || ||| | || ||| || || | | | | Sbjct 108173 TGATCGAGATCTACGGCCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGTGATCG 108232 Query 66214 CCAATGCCCAGAAGGCCGGTGGCAACGCTGCCTACATCGACGCTGAGCACTCCCTGGACC 66273 |||| ||||||| ||| |||| || || | | ||||||| |||||| | || || | Sbjct 108233 CCAACTGCCAGAAGAACGGCGGCACTGCCGCGTTCGTCGACGCCGAGCACGCGCTCGATC 108292 Query 66274 CTGAGTA---CGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGG 66330 | || ||||||| || || ||| || | ||| |||| |||| ||||| | Sbjct 108293 CCACCTATGCCGCCAAG---CTGGGCGTGAACGTGGACGACCTGCTGGTCTCCCAGCCCG 108349 Query 66331 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCA 66390 |||| ||||| ||||| ||||| |||| ||| | || || || |||| | || Sbjct 108350 ACACCGGCGAACAGGCGCTGGAAATCGCCGACATGCTGGTGCGCTCCGGCGCGGTGGATG 108409 Query 66391 TCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCG 66450 | || || || ||||| || || || || ||| ||||| |||||||||| || | Sbjct 108410 TGGTGGTGGTCGACTCGGTCGCCGCATTGACCCCGAAGGCCGAAATCGAAGGCGAGATGG 108469 Query 66451 GGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCG 66510 | || ||||| ||||||||||| ||||| ||| ||||| ||||||||||||||| Sbjct 108470 GCGATTCCCACGTGGGCCTGCACGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCG 108529 Query 66511 GCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCG 66570 || |||| | | ||| ||| | ||| |||||||| | ||| |||||||| Sbjct 108530 CCAACATCAAAAAGTCGAACTGCCTGGTGATCTTCATCAACCAGATCCGCATGAAGATCG 108589 Query 66571 GCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACG 66630 || || | | |||| |||||||||||| |||||||| || ||| |||||||| Sbjct 108590 GCGTGATGTTCGGCAGCCC---CGAGACCACCACTGGCGGCAATGCGCTGAAGTTCTACG 108646 Query 66631 CCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCG 66690 |||| || |||||||| |||| ||||||| | | |||| | |||||||||| ||| Sbjct 108647 CCTCGGTGCGCATGGACATCCGCCGCATCGGTGCGGTGAAGAAGGGCGATGAGGTGATCG 108706 Query 66691 GCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAATGCCG 66750 || ||||| || ||||| || ||||||||| |||| |||||| ||| | |||| Sbjct 108707 GCTCGGAAACCCGCGTCAAGGTGGTGAAGAACAAGGTGGCTCCGCCGTTTCGCCAGGCCG 108766 Query 66751 AGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCG 66810 ||||| || | ||||| |||||| |||||| || | ||| || |||| |||| || Sbjct 108767 AGTTCGAGATCCTCTACGGCGAGGGCTCCTCGCGCGAAGGCGAGATCATCGAACTGGGCG 108826 Query 66811 TGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACG--T 66868 || ||||| |||| | | ||||| |||||||||| || ||| || | || || | Sbjct 108827 TGGCGCAGAACCTGATCGACAAGTCCGGCGCCTGGTACAGCTACAAGGGC--GACCGTAT 108884 Query 66869 CGCCCAGGGCAAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCGGACATCACCGACTC 66928 || |||||||||| || | ||||| ||||||| |||||||| |||| || || Sbjct 108885 CGGCCAGGGCAAGGAAAACGTGCGCCAGTTCCTCAAGGACAACCCGGCCATCGCCAACGA 108944 Query 66929 CATCGA 66934 ||||| Sbjct 108945 GATCGA 108950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 239780174901600