Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq33810 84.2 2e-11 >seq33810 Length=274286 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 34629 AGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACA 34688 ||||| ||||||||| || || || || || ||||| | || ||||||||||||| Sbjct 221634 AGCTGAGCTGCCAGCTGTACCAGCGCTCCGGCGACATCTTCCTCGGCGTGCCGTTCAACA 221693 Query 34689 TTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTGGG 34747 | || || || || |||||||| ||||| | || || || ||| ||| ||| | |||| Sbjct 221694 TCGCCAGCTATGCGCTGCTCACCCACATGGTGGCGCAGGT-GTGCGGGCTGG-GCGTGGG 221751 Query 34748 -GAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCG 34806 || | ||||| ||| |||| || |||||| | ||| ||||| | || | | || Sbjct 221752 CGACTTCGTGCACACGCTGGGCGACGCGCATCTGTACAACAACCATGTGGAACAGGCGCG 221811 Query 34807 GATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845 | |||||| || ||||| || || || || | ||| Sbjct 221812 ACTGCAGCTGACCCGCGAGCCGCGCCCCTTGCCGCGGCT 221850 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559 ||| | || || || || ||||| || |||||| | || | | || | ||||| Sbjct 221850 AGCCGCGGCAAGGGGCGCGGCTCGCGGGTCAGCTGCAGTCGCGCCTGTTCCACATGGTTG 221791 Query 6560 AGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTC-CCCAGGAACCAACCC-CACGA 6617 ||| | |||||| || |||| ||| ||||| | || |||| | ||| ||| ||| | Sbjct 221790 TTGTACAGATGCGCGTCGCCCAGCGTGTGCACGAAGTCGCCCACGC-CCAGCCCGCAC-A 221733 Query 6618 CATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACC 6677 | || || | ||||| |||||||| || || || || |||||||||||||| || | Sbjct 221732 CCTGCGCCACCATGTGGGTGAGCAGCGCATAGCTGGCGATGTTGAACGGCACGCCGAGGA 221673 Query 6678 CCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCT 6716 ||||| || || || || || ||||||||| ||||| Sbjct 221672 AGATGTCGCCGGAGCGCTGGTACAGCTGGCAGCTCAGCT 221634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446011271053440