Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq938 127 2e-24 seq29890 116 3e-21 >seq938 Length=1173706 Score = 127 bits (140), Expect = 2e-24 Identities = 405/625 (65%), Gaps = 5/625 (1%) Strand=Plus/Plus Query 4540 ACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAA 4599 |||| | || || || || || |||| ||| |||||||| || || ||||| |||| Sbjct 1020734 ACAACAGGCATGCGAAGTCGCAGTGCAGACCCTCGTCTCTCGAGATTAGCTCGTTGGAAA 1020793 Query 4600 ACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAG 4659 | |||||||| ||||| | || | || || | ||||||||| ||| || ||| | Sbjct 1020794 AAGTTAATCCTGGCATGAGGCCGCGTTTCTTCAACCAAAATATGGCGCAGAAGCTCCCGG 1020853 Query 4660 AAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTT 4719 | |||||||| || || ||| ||||| || | || || | || || || | Sbjct 1020854 AGAAGAATATCCCCTCAACGCAAGCAAAGGCGAGTAGCCGCTCGGCAAAAGATTCGGATC 1020913 Query 4720 TGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779 ||| ||||| || ||||| || || || |||| ||||| || | ||||| | Sbjct 1020914 CGTCG---ATCCAACGTAGGGCCCACTTGGCCTTCTTCTCCACGCATGGGACTGTGTCAA 1020970 Query 4780 TAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 |||| || | ||| || || | |||| || || || || | || || | Sbjct 1020971 TAGCTCGGAAGAGGCGACTCTTCTCGGCCGAATCTTTGATGTATGTTTCGAGCAGAAGAC 1021030 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 | ||||| || || || || || || || |||||||| ||||||||||| | || | Sbjct 1021031 TGTACATCTCGGAGTGGATGTTCTCGATTGCAATCTGGAATCCGTAAAACGCGCGCGCCT 1021090 Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959 | | || || ||||| || || || | ||| || || || || || || Sbjct 1021091 CGGAAACCTGGACTTCTTTCATGAACCTGCCAGCTAGATTCTCCAAAACGATGCCATCGG 1021150 Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTT 5019 ||| ||||| || |||| |||||| || || | || || || | | || || Sbjct 1021151 AGGCAGCAAAGAAGGCCAGAACATGTTTGATGAAATGCTTCTCATCGGCAGTGAGGGCTT 1021210 Query 5020 TCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCG 5079 |||||||| | || | | ||||| || || || | |||||||| || ||||| | Sbjct 1021211 CCCAGTGGGCGAGGTCCTGCGACAAATCTACCTCCTCGGCTGTCCAAAAGGAAGCTTCGG 1021270 Query 5080 CTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA-AATCTGTTG 5138 | || |||||||| |||||| | ||| |||| ||| || | || ||| || | || Sbjct 1021271 CCTTCTTGTACATTTCCCAAATCTGAGGGTACTCAATGGGGAACAT-ACAGAAGCGGTCT 1021329 Query 5139 TCGTTAGGTGTAAGAAGCGGTTCTT 5163 ||| | | ||| |||||||||| Sbjct 1021330 GGGTTCGCCGCAAGGAGCGGTTCTT 1021354 >seq29890 Length=111316 Score = 116 bits (128), Expect = 3e-21 Identities = 372/575 (65%), Gaps = 3/575 (1%) Strand=Plus/Plus Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| || || || || |||| |||||||||||| || | ||||| || || || Sbjct 72424 AAACAGGCGAAGTCGCAGTGCAGCCCTTCGTCTCTGGAGATTAACTCGTTCGAGAAAGTC 72483 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 | ||| ||||||| |||| |||||| ||||| ||||| | | || || |||||| Sbjct 72484 AGTCCCGGCATTAGCCCTCGCTTTTTGAGCCAGAATATGGAGCAGAAGCTTCCGGAAAAG 72543 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 ||||| ||||| || || || || |||| ||| | | ||||| || | | Sbjct 72544 AATATACCTTCGACACAAGCGAAGGCCACTATTCGCTCCGCAAACGA-CT--CCGACCCC 72600 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 | ||||| | ||||| || || || ||| | ||| || || || | || ||| Sbjct 72601 TCGATCCAGCGGAGGGCCCACTTGGCCTTCGTCTCGATGCAGGGGATGGTTTCGATCGCG 72660 Query 4785 TTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATAC 4844 | || | | || || | |||| || ||||| || | | ||||| ||| Sbjct 72661 TGGAAGAGCAGGTTCTTCTCCGCGGAATCTTTGATGTAAGTTTCGAGCAAGAGGCTGTAC 72720 Query 4845 ATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTT 4904 || || || || || || ||||| || |||||||| ||||| ||| | ||| || | Sbjct 72721 ATCTCGGAGTGGATGTTCTCTATGGCGATCTGAAAGCCGTAGAAGGCCCGAGCCTCCGAG 72780 Query 4905 ACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCT 4964 || || || || || |||| | | | ||| || ||| || ||||| || Sbjct 72781 ACCTGGACCTCCTTCATGAATCGGCCCGCAAGGTTCTCCAATACGATGCCGTCGGATGCG 72840 Query 4965 GCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAG 5024 || || || || | || || || || | || ||||||| |||| | |||| Sbjct 72841 GCGAAGAAGGCGAGCACGTGTTTGATGAAATGCTTCTCGTCAGCAGTAAGAGCGTCCCAG 72900 Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084 || | | ||| | | ||||| || || ||| | ||||| || || ||||| ||||| Sbjct 72901 TGTCGGAGATCCTGGGACAAATCGACCTCCTCAGCCGTCCAGAAGGAGGCTTCGGCTTTC 72960 Query 5085 TTGTACATAGACCAAATATCAGGATACTGAATCGG 5119 |||||||| ||| || | ||| ||||| ||||| Sbjct 72961 TTGTACATCTCCCAGATTTGAGGGTACTGTATCGG 72995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424958614623416