Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq33802 181 3e-41 seq33774 96.9 1e-15 seq33836 86.0 2e-12 >seq33802 Length=298597 Score = 181 bits (200), Expect = 3e-41 Identities = 163/202 (81%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTG 34046 ||||||||| ||||| ||||||| | ||| |||| ||| || | | ||| || Sbjct 56250 GCCGTTGCGCTGCTTGCCGATGATGATCTCGGCCAGGCCCTTGTCCGCCGATTCCTTGTT 56309 Query 34047 ATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGA 34106 ||| |||||| ||||| | |||||||||||||||||||||||||||||| || || || Sbjct 56310 GTAGTACTCGTCGCGGTAGATGAACATGATCACGTCGGCGTCCTGCTCGATGGCGCCCGA 56369 Query 34107 CTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGC-CGCTGCTCCAGGGAGCGGTTGA 34165 |||||||||||| ||||||||||| |||||| ||||| ||||| ||||| |||||||| | Sbjct 56370 CTCGCGCAGGTCGGACATCATCGGGCGCTTG-TCGGCGCGCTGTTCCAGCGAGCGGTTCA 56428 Query 34166 GCTGCGACAGCACGATCACGGG 34187 |||||| || |||||||||| Sbjct 56429 ACTGCGAGAGGGCGATCACGGG 56450 >seq33774 Length=113159 Score = 96.9 bits (106), Expect = 1e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 42754 ACCATGCTGATCCTGACCAGAAGACCCGGCGAAACCCTGCATATCGGCGACAACATCACC 42813 |||||| |||| |||||| | || |||||||||||| ||||||||| | | ||| Sbjct 112774 ACCATGTTGATTCTGACCCGCAGGGTTGGCGAAACCCTGATGATCGGCGACGAGGTGACC 112833 Query 42814 GTCACGGTCCTTGGCAGCCAGGGCGACCAGGTGCGCCTCGGCATCACCGCCCCGGACGAC 42873 ||||| || || ||| | ||| | ||||| ||| ||||||||| ||| ||| | | Sbjct 112834 GTCACCGTTCTGGGCGTGAAAGGCAATCAGGTACGCATCGGCATCAACGCGCCGAAGAAT 112893 Query 42874 GTCGCCATCCACCGCTCCGAGATCTACCAGC 42904 |||||| | || ||| ||||||||||||| Sbjct 112894 GTCGCCGTGCATCGCGAAGAGATCTACCAGC 112924 >seq33836 Length=293188 Score = 86.0 bits (94), Expect = 2e-12 Identities = 114/151 (75%), Gaps = 8/151 (5%) Strand=Plus/Minus Query 47937 TCGTC-CGCGAAACCCGGCGAGCGTCGATTTC-GGCGATCCAGCGCAAGCTGAAGATCGG 47994 ||||| ||| | ||||| || || ||||| || |||| | || || | || ||||| Sbjct 275438 TCGTCACGC-AGACCCGCCGCGCCTCGATCTCCGGCG-TGCAACGGCATTTGCGCATCGG 275381 Query 47995 CTACAACCGCGCAGCCCGCATCATCGAGCGGATGGAGAAAGAAGGCGTAGTCACAGCGGC 48054 |||||||||||| || ||| | ||||||| ||||||| | || ||||| || ||||| | Sbjct 275380 CTACAACCGCGCCGCGCGCCTGATCGAGCAGATGGAGCAGGACGGCGTGGT--CAGCGCC 275323 Query 48055 CGACAG--CAACGGCGGCCGCGAGGTACTGG 48083 | ||| ||||||| ||||||||| |||| Sbjct 275322 CCGCAGCACAACGGCAACCGCGAGGTGCTGG 275292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159698457546480