Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq33810 156 7e-33 seq33775 91.5 2e-13 >seq33810 Length=274286 Score = 156 bits (172), Expect = 7e-33 Identities = 151/194 (78%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||| ||||| |||||||||||| | ||||||| |||||||| || ||||| || Sbjct 221198 GACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTGGCAGATGCGCTTCGACCTCGCC 221257 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 ||||||||||| ||||| ||||| || ||| | ||| | || ||| | ||||||||| Sbjct 221258 GAAGGCTTCCCGCTGGTCACCACCAAGAAGCTGCACTTGAAGTCCATCGTCCACGAGCTG 221317 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 | ||||||||| | || |||||||| ||| ||||| || || |||| |||| ||| Sbjct 221318 ATCTGGTTCCTGCAGGGCGACACCAATATCGCCTACCTCAAGGAGCACGGCGTCAGCATC 221377 Query 202729 TGGGACGAATGGGC 202742 |||||||||||||| Sbjct 221378 TGGGACGAATGGGC 221391 Score = 95.1 bits (104), Expect = 2e-14 Identities = 152/215 (71%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 203296 TGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATCGCCTCG 203355 || ||| |||| |||||| || ||| ||||| | ||||||||||| ||||||||| Sbjct 221642 TGCCAGCTGTACCAGCGCTCCGGCGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGC 221701 Query 203356 TATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAG---GAGTTC 203412 ||||| | || || | ||||| || |||||| | | ||| || | || ||| Sbjct 221702 TATGCGCTGCTCACCCACATGGTGGC---GCAGGTGTGCGGGCTGGGCGTGGGCGACTTC 221758 Query 203413 GTCTGGACAGGC--GGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTCTGC 203470 | || ||| || || || | |||||||| ||||||| |||| ||||| || |||| Sbjct 221759 G--TGCACACGCTGGGCGACGCGCATCTGTACAACAACCATGTGGAACAGGCGCGACTGC 221816 Query 203471 AGTTAACTCGTGACCCGCACCCATTACCGCGTCTG 203505 || | || || || |||| ||| || ||||| ||| Sbjct 221817 AGCTGACCCGCGAGCCGCGCCCCTTGCCGCGGCTG 221851 >seq33775 Length=276061 Score = 91.5 bits (100), Expect = 2e-13 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 2255 TGGCGGGTTACTCAAGCGGC-AACGAGAGCAGACTGTAAATCTGTTGACTTCGGTCTTCG 2313 ||| ||| ||| |||||||| |||| | |||||||||||||||| || ||| | ||||| Sbjct 275502 TGGAGGGATACCCAAGCGGCCAACGGGGGCAGACTGTAAATCTGCTGGCTTACGCCTTCG 275561 Query 2314 GTGGTTCGAGTCCACCACACGCCACCAGTT 2343 ||||||||| |||||| | | ||||||||| Sbjct 275562 GTGGTTCGAATCCACCTCCCTCCACCAGTT 275591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784361135792000