Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq78578 113 1e-20 seq33768 95.1 3e-15 >seq78578 Length=1014 Score = 113 bits (124), Expect = 1e-20 Identities = 193/279 (69%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 26906 CGGCCATTCAT---GCCCACGTTGATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCA 26962 |||||||||| | | ||| ||| || ||||||||||| | || || | | || Sbjct 227 CGGCCATTCACCTGGTCGACGACGATCTCGGTGGTGTAGCGTTTCACTCCGTCTTTTTC- 285 Query 26963 GTCCATTTACGGGTTCGCAGACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTAT 27022 ||| | ||||| || ||| |||||| | | | || ||| ||||| ||||| || Sbjct 286 --CCACTCGCGGGTGCGGAGAGTGCCTTCGACGTAGCACTGGCTCCCTTTTCGCAGATAC 343 Query 27023 TCACCAGCGATTTCCGCCAGCTTGCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCT 27082 ||||| |||||||| || | ||||||||||| || ||||||||||| || || |||| Sbjct 344 TCACCCGCGATTTCGGCGATCTTGCCGAAGAACACTACGCGGTGCCACTCGGTACGCTCC 403 Query 27083 TTTGGTTCGCCTGTGGCCTTATCTTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCA 27142 | | | ||| || |||||||||||| ||||| | ||||| | | | | || | Sbjct 404 TGCTGCTGGCCGGTCTGCTTATCTTTCCAGCTTTCGCTGGTGGCCAGGGTTATGTTCGTT 463 Query 27143 ACTGCGCCACCTGACGGCATGTAGCGCACTTCTGGATCG 27181 || ||| || ||| ||||||| ||||| || ||| Sbjct 464 ACGGCGTTGCCGTTCGGGGTGTAGCGGACTTCCGGGTCG 502 >seq33768 Length=156001 Score = 95.1 bits (104), Expect = 3e-15 Identities = 189/278 (68%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 26922 CGTTGATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCA 26981 || |||| || |||| ||||||||| | ||| | || || || | || ||| |||| Sbjct 53423 CGATGATGTCGGTGGAGTAGCGCTCGATGCCGTCCTTGTCGGTGTACTTGTCGGTGCGCA 53364 Query 26982 GACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCA 27041 | || || ||| | |||| | |||||| |||||| || || ||||| || |||| Sbjct 53363 GCGAACCCTCGATGTAGACCTGCCGGCCTTTCTTCAGGTACTCGCCGGCGATCTCGGCCA 53304 Query 27042 GCTTGCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCT 27101 |||||||||| | |||||||||||||| || |||| | | ||||| | || Sbjct 53303 GCTTGCCGAACAGCTTCACGCGGTGCCATTCGGTGCGCTCCTGGCGCTCGCCGCTCTGCT 53244 Query 27102 TATCTTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCG--CCACCTGACGG 27159 | || |||||| ||| | ||||| |||| || ||| | ||| | ||| ||| Sbjct 53243 TGTCGGTCCACTGTTCCGAAGTGGCGATGCGCAGGCTGGTGATGGCGGTGCCGCTGCCGG 53184 Query 27160 CATGTAGCGCACTTCTGGATCGTTGCCTAAATTACCGA 27197 ||||||| ||| |||||| ||||| || |||| Sbjct 53183 --TGTAGCGGGTTTCCGGATCGGCGCCTAGGTTGCCGA 53148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133376635797120