Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq33810 284 7e-72 >seq33810 Length=274286 Score = 284 bits (314), Expect = 7e-72 Identities = 561/818 (69%), Gaps = 44/818 (5%) Strand=Plus/Plus Query 786 CCTACGAAGACCTGTTGCGCGACATCCTGGAGACTGGCAAGTCGAAGGATGATCGCACCG 845 ||||| |||||| ||||| || | |||||| |||| | ||| || ||||||| Sbjct 221148 CCTACCTCGACCTGCTGCGCCACGTGCTGGAGCACGGCACGGAGAAATCCGACCGCACCG 221207 Query 846 GCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACCGAGGGCTTCC 905 | |||||||||| ||| ||||||| ||| |||| | ||||||| |||| ||||||| Sbjct 221208 GTACCGGCACGCGCAGCGTGTTCGGCTGGCAGATGCGCTTCGACCTCGCCGAAGGCTTCC 221267 Query 906 CGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTTCTGTGGTTCC 965 ||||||||||||| ||| | ||||| || || | | |||| || | ||||||| Sbjct 221268 CGCTGGTCACCACCAAGAAGCTGCACTTGAAGTCCATCGTCCACGAGCTGATCTGGTTCC 221327 Query 966 T-CAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCATCTGGGACGAG 1024 | ||| |||||||| || | ||||| || ||||||||| |||||||||||| Sbjct 221328 TGCAG-GGCGACACCAATATCGCCTACCTCAAGGAGCACGGCGTCAGCATCTGGGACGAA 221386 Query 1025 TGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGGCACTGGCAT 1084 ||||||||||| ||| ||||| || || ||||||||| ||||||||| |||| Sbjct 221387 TGGGCCGACGCGCACGGCAACCTGGGCCCGGTCTACGGCAGGCAGTGGCGCTCGTGGCCG 221446 Query 1085 GTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGGAGCTGCTTCGC 1144 || ||||| || || || | ||||||||| | ||||| | | ||| Sbjct 221447 ACCGCCGACGG-----CGGCGCGG-TGGACCAGATCCGCTGGGTGGTGGACGAGATCCGC 221500 Query 1145 GAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGAC 1204 |||| || ||||||||| | || ||| |||||||| || || || | Sbjct 221501 CGCAACCCCGATTCGCGCCGGCTGATCGTCAGCGCGTGGAACGTGGGCGAGCTGCCGAAG 221560 Query 1205 ATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGT-----CGTCGACGG----- 1254 ||||| || || ||||||| |||||||| | ||||| | ||||||| Sbjct 221561 ATGGCGCTGATGCCCTGCCACACGCTGTTCCAGTTCTACGTGGCCCCTTCGACGGGCTCA 221620 Query 1255 ---CCGGC--TCTCGCTG------CAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGT 1303 | ||| | |||| ||| | ||||||||| || ||||| |||||||| Sbjct 221621 GGACAGGCGGGCAAGCTGAGCTGCCAGCTGTACCAGCGCTCCGGCGACATCTTCCTCGGC 221680 Query 1304 GTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGC 1363 ||||||||||| |||||| || ||||| ||| | |||||| | |||||| | ||| Sbjct 221681 GTGCCGTTCAACATCGCCAGCTATGCGCTGCTCACCCACATGGTGGCGCAGGTGTGCGGG 221740 Query 1364 CTGCGGGTGGGTGAGCTGATC-TGGACCGGC--GGCGACTGCCACATCTACAACAACCAC 1420 ||| | ||||| || || || || || || |||||| || | ||||||||||| Sbjct 221741 CTGGGCGTGGGCGA-CT--TCGTGCACACGCTGGGCGACGCGCATCTGTACAACAACCAT 221797 Query 1421 GTCGACCAGGCGCTGATGCAGCTCCGCCGACGA-CCGCGGCCCTACCCGAGGCTCGTGCT 1479 || || ||||||| ||||||| ||| ||| ||||| |||| ||| |||| ||||| Sbjct 221798 GTGGAACAGGCGCGACTGCAGCTGACCCG-CGAGCCGCGCCCCTTGCCGCGGCTGGTGCT 221856 Query 1480 ACACCAC-----GCGCCGTCGATCTTCGACTACCGGTACGAGCACATCCACCTCGTGAAC 1534 ||| | |||| | | | || | ||| |||| | ||||| | ||| | Sbjct 221857 CAACCCCGAGGTGCGCAG--GCTGGAGGATTTCCGCTACGCGGACATCGCCATCGAAGGC 221914 Query 1535 TACGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGT 1572 ||||| ||||||||| |||||||||||||||| || || Sbjct 221915 TACGAGCCGCACCCGGCGATCAAGGCGCCGGTCGCGGT 221952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 294681237258552