Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dorcoceras_20hygrometricum_20[genbank_20GCA_5F001598015.1_202016-04- 28] 401,752 sequences; 1,521,360,707 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq34867 486 5e-133 seq347750 156 1e-33 >seq34867 Length=6033 Score = 486 bits (538), Expect = 5e-133 Identities = 379/451 (84%), Gaps = 1/451 (0%) Strand=Plus/Minus Query 9182 TGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAAC 9241 |||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 1468 TGAACGAGCCCCTTGAAACACAGGACACCGTTTCCCCCTTACCATAAGGGATAGGCAAAC 1409 Query 9242 GGTTATGTTTATGACTAACAGCAACGACAAGAGCGGTGAGCTATTGGGTCAGGAGCGGCG 9301 | | |||||||||||| |||||| ||||| ||| || | | || |||||||||| Sbjct 1408 GACTGTGTTTATGACTACCAGCAAAGACAAAAGCATCGAAGTGCTTGGCTAGGAGCGGCG 1349 Query 9302 GCGCCGCTGGAGCCCAGAGCAAAAGCTGGCGATGGTTCGCGAGAGCCTTGAGCCAGGACA 9361 |||||||||||| ||| | || ||||| ||| | |||| |||||| ||||| || || Sbjct 1348 TCGCCGCTGGAGCGTCGAGGAGAAACTGGCCATGATGCGCGGGAGCCTGGAGCCCGGGCA 1289 Query 9362 CAGCGTTTCGGTGGTGGCCCGGCGCAACGGCGTCAATGCCAATCAACTATTTCACTGGCG 9421 ||||| ||||||||||||||||||||||| ||||| |||| ||||| || |||||||| Sbjct 1288 AAGCGTCTCGGTGGTGGCCCGGCGCAACGGTATCAATCCCAACCAACTGTTCCACTGGCG 1229 Query 9422 CAAGCTTTACCAGGACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAGCCGTGGTGCCTGC 9481 |||||| ||||||||||| || | ||||| ||||| |||||||| || |||||||| || Sbjct 1228 CAAGCTCTACCAGGACGGCAGCCTCTCGGCAGTCAGTGCCGGTGAGGCGGTGGTGCCCGC 1169 Query 9482 GTCCGAGTTGAGCGATGCGCTCAGGCAGATTCGTGAGCTACAACGGATGCTGGGCAAGAA 9541 ||| ||||| |||||| |||| |||||| || ||||| ||||||||||| |||||||| Sbjct 1168 TTCCTAGTTGGCCGATGCCCTCAAGCAGATCCGCGAGCTGCAACGGATGCTAGGCAAGAA 1109 Query 9542 GACGATGGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGAT 9601 || ||||| ||||| ||||||| || || |||||||| |||||||||||||||||||| Sbjct 1108 GATCATGGAGGCCGAGATCCTCAAGGAAGCGGTGGAGATCGCCCGCTCGCGAAAATGGAT 1049 Query 9602 TGCGCACTCACCCTTGTTGCCGGGGGACGGT 9632 ||||||||| ||| ||||||||||||||||| Sbjct 1048 TGCGCACTC-CCCCTGTTGCCGGGGGACGGT 1019 >seq347750 Length=267 Score = 156 bits (172), Expect = 1e-33 Identities = 145/184 (79%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 28485 CGACCTGGCGGGCATGTTCTATGGATCTGGCCTTGATGCGGGTCCAGCCCTTGCCCCAGT 28544 |||||||||||||||| | | | | || | |||||| ||||| ||||||||||| Sbjct 184 CGACCTGGCGGGCATGCTTGAGGCTGCCGGTCCGGATGCGCTTCCAGTTCTTGCCCCAGT 125 Query 28545 CCTGGGTAAGGCCGCCCTGATCCCGGAAGAACGGCCCGTGCTTCACGAACACCTTTTTGC 28604 ||| || || |||||||| | ||||||||| ||||||||||||||||| || Sbjct 124 CCTCCGTCAGTCCGCCCTGGCTCACGAAGAACGGGCCGTGCTTCACGAACACGGCGCCGC 65 Query 28605 CGGCGTTGCGGTGGACGAAGTAGGTCTCGTCGTCGATCGGGTCGTCGGCGCGGTCATGCT 28664 |||||||||| |||||||||||| | |||||||||||| ||||| |||||||| |||| Sbjct 64 CGGCGTTGCGCATGACGAAGTAGGTGTTGTCGTCGATCGGCTCGTCCGCGCGGTCGTGCT 5 Query 28665 CGAT 28668 |||| Sbjct 4 CGAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137704688520336