Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosera_20capensis_20[genbank_20GCA_5F001925005.1_202016-12-30] 12,713 sequences; 263,787,800 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq8649 104 4e-17 seq386 104 4e-17 seq10718 98.7 1e-15 seq10520 95.1 2e-14 seq7690 95.1 2e-14 seq9675 89.7 8e-13 >seq8649 Length=19160 Score = 104 bits (114), Expect = 4e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| || || ||||| || || ||| | || | || ||| | Sbjct 6214 ATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACAATCACTCTTGAAGTGGAGAGCTCA 6273 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | ||| || |||||||| || || || || ||||||||||| Sbjct 6274 -GACACTATTGATAACGTGAAAGCAAAGATTCAAGACAAGGAGGGCATCCCACCTGATCA 6332 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||| || ||||| || || || || ||||| | ||||| ||| || || || Sbjct 6333 GCAAAGGCTGATCTTTGCTGGCAAGCAGTTGGAGGACGGGCGAACCCTAGCTGACTACAA 6392 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || ||||| | || |||| | ||| | || ||||| || Sbjct 6393 CATTCAGAAGGAGTCAACCCTTCACCTGGTGCTTCGTCTCCGTGGTGGCAT 6443 >seq386 Length=19993 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| ||||| ||||| ||||| || | ||| | || | Sbjct 3017 ATGCAAATCTTCGTCAAGACCCTAACTGGCAAGACTATCACCCTCGAGGTGGAGAGTTCT 3076 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || |||||| || ||||| || ||||| ||||| || || Sbjct 3077 GATACGATTGACAATGTGAAGGCGAAAATCCAGGATAAGGAGGGTATCCCACCAGACCAG 3136 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | |||||||||||||| || | |||||| | || || | | || ||||| Sbjct 3137 CAGAGGTTGATTTTTGCAGGAAAGCAGCTCGAGGATGGCCGCACCCTTGCTGACTATAAC 3196 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| || || || | ||| | || | || | || ||||| || Sbjct 3197 ATTCAAAAGGAGTCCACCCTTCATCTTGTGCTCCGCCTCCGTGGTGGCAT 3246 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| || | ||||| | || || || || || || | ||| |||| ||| Sbjct 2789 ATGCAAATTTTCGTGAAGACCTTGACTGGGAAGACAATCACCCTTGAGGTTGAGAGCTC- 2847 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || || || ||||| || ||||| || || || ||||| Sbjct 2848 TGATACGATTGACAATGTGAAGGCTAAGATCCAAGACAAGGAAGGGATCCCCCCGGATCA 2907 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||||||||| || || || || | |||||| | || || | | ||||| || Sbjct 2908 GCAAAGGCTTATTTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTTGCGGATTACAA 2967 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || |||||||| || || | || ||||| || ||| | || ||||| || Sbjct 2968 CATCCAAAAAGAGTCCACCCTCCACTTGGTGTTGCGTCTCCGTGGTGGCAT 3018 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | |||||||| || ||||| || || || ||||| | ||| | Sbjct 2105 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGACCATCACCCTAGAGGTGGAAAGCTCT 2164 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || ||||| || ||||| || || || || || Sbjct 2165 GACACCATTGATAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCGCCAGACCAG 2224 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||| ||||| ||||| || | |||||| | || || | | || ||||| Sbjct 2225 CAAAGGCTTATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGCACCCTCGCTGACTATAAC 2284 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || || | || ||||| || ||| | || ||||| || Sbjct 2285 ATCCAGAAGGAGTCTACCCTTCACTTGGTGTTGCGTCTTCGCGGTGGGAT 2334 >seq10718 Length=202232 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| | ||||| | || || || || || || | ||| | || ||| Sbjct 180516 ATGCAAATTTTTGTGAAGACCTTGACTGGGAAGACAATCACCTTGGAGGTGGAGAGCTC- 180458 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||||| || | || || || || ||||| || ||||| ||||| ||||| Sbjct 180457 TGATACAATTGACAACGTCAAGGCTAAGATCCAGGATAAGGAGGGTATCCCACCAGATCA 180398 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||||||||| ||||| || || || | |||||| | || || | | || || || Sbjct 180397 GCAAAGGCTTATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACCCTGGCCGACTACAA 180338 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| || || || | || ||||| || ||| | || ||||| || Sbjct 180337 CATTCAAAAGGAGTCCACCCTCCACTTGGTGTTGCGTCTTCGTGGTGGGAT 180287 Score = 95.1 bits (104), Expect = 2e-14 Identities = 166/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || | ||||| || || ||||| || || || | ||| | || ||| Sbjct 180744 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATTACCTTGGAGGTGGAGAGCTCC 180685 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | || || || || || ||||| ||||| || || || || Sbjct 180684 -GATACGATTGACAATGTTAAGGCCAAGATCCAGGACAAAGAGGGTATCCCTCCAGACCA 180626 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||||||||| ||||| || || || | || ||| | || || | | |||||||| Sbjct 180625 GCAAAGGCTTATCTTTGCCGGGAAGCAGCTTGAAGATGGCCGCACCCTCGCTGATTATAA 180566 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || || ||||| |||||| | || |||||| | ||| | || ||||| || ||| || Sbjct 180565 CATCCAGAAAGAGTCAACTCTTCACTTGGTTCTGCGTCTCCGTGGTGGGATGCAAATTT 180507 >seq10520 Length=174828 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 124627 TTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAAT 124686 |||||||||||||||| || | || || || || |||||||| |||||||| || || Sbjct 60637 TTCAAGATAAAGAAGGAATCCTGCCAGACCAGCAGAGGCTTATCTTTGCAGGGAAGCAGC 60578 Query 124687 TAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGG 124746 | || || || | || ||| || || || |||||||| ||||| || ||||| |||| Sbjct 60577 TTGAAGACGGTAGGACCCTAGCGGACTACAACATTCAAAAGGAATCCACCTTGCACTTGG 60518 Query 124747 TTTTACGTTTACGAGGTGGTAT 124768 || | ||||| |||| || || Sbjct 60517 TTCTTCGTTTGAGAGGCGGGAT 60496 >seq7690 Length=218893 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 124627 TTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAAT 124686 |||||||||||||||| || || || || || ||||||||||| ||||| || || || Sbjct 44756 TTCAAGATAAAGAAGGAATCCCGCCAGACCAGCAAAGGCTTATCTTTGCTGGTAAGCAGC 44815 Query 124687 TAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGG 124746 | || || | | || ||| || || || ||| |||| ||||| || ||||| |||| Sbjct 44816 TTGAAGAAGGCAGGACCCTAGCGGACTACAACATTAAAAAGGAATCCACCTTGCACTTGG 44875 Query 124747 TTTTACGTTTACGAGGTGGTAT 124768 || | ||||| ||||||| || Sbjct 44876 TTCTTCGTTTGAGAGGTGGGAT 44897 Score = 93.3 bits (102), Expect = 6e-14 Identities = 156/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||| ||| ||| | ||||| || ||||| ||| |||| || | ||| | || || | Sbjct 44896 ATGCGAATTTTTGTGAAGACCCTCACAGGGAAATCTATCACCCTCGAGGTAGAG--AACT 44953 Query 124599 --GATACAATTTCTAATTTAAA-ACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 || || || ||| | || ||| || |||||||||||||||| || || || || Sbjct 44954 CGGACACCATCCAAAATCTGAAGACA-AAGCTTCAAGATAAAGAAGGAATCCCGCCAGAC 45012 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 | ||||||||||| |||||||| || || | |||||| | | || | | || ||| Sbjct 45013 GAGCAAAGGCTTATCTTTGCAGGTAAGCAGCTCGAGGATGGCAGGACCCTGGCCGACTAT 45072 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTT 124756 || || || || || || || ||||| |||||| | ||||| Sbjct 45073 AACATCCAGAAGGAGTCCACCTTGCACTTGGTTCTCCGTTT 45113 >seq9675 Length=46304 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || |||||||| || || ||| | ||| | || | Sbjct 42443 ATGCAAATCTTCGTTAAGACTCTCACAGGCAAGACAATCACTCTCGAGGTCGAGAGTTCT 42502 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| || | || || || |||||||| || || || || || || || Sbjct 42503 GACACAATAGACAACGTCAAGACCAAGATCCAAGATAAGGAGGGGATTCCCCCAGACCAG 42562 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| |||||||| | || ||| | || || | | ||||| || Sbjct 42563 CAGCGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTTGCTGATTACAAC 42622 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGT 124747 |||||||||||||||||| | ||| |||| Sbjct 42623 ATTCAAAAAGAATCAACTCTCCATCTGGT 42651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755335948598400