Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosera_20capensis_20[genbank_20GCA_5F001925005.1_202016-12-30] 12,713 sequences; 263,787,800 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq6168 87.8 4e-12 seq12522 84.2 5e-11 >seq6168 Length=43049 Score = 87.8 bits (96), Expect = 4e-12 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 331299 CTTCATCACGGTCATCTTATTTTCGGTCATCGTCCCGGTCTTATCACT-CAGAAGCATGG 331357 ||||| ||||||||| | ||| ||| | |||||||||||||||||| |||| | ||| Sbjct 28512 CTTCACCACGGTCATGTGATTGGTGGTGAGCGTCCCGGTCTTATCACTGCAGATAC-TGG 28570 Query 331358 ATGTACTGCCCAGGGTCTCGCAAGCAGACAGATGACGCACGAAGAG-GTGATCATTCATC 331416 | | |||| ||||||||||| | ||||| || || |||| | ||||||||| Sbjct 28571 TGGCAGATCCCATTGTCTCGCAAGCTGCAAGATGGCGGAC-CAGAGCCTTGTCATTCATC 28629 Query 331417 ATCTTCTTGATTGAAGTGGTTAGAGTAATCAAAACTGCCGCAGGAAGACCCTCTGGGAGA 331476 |||||||| |||| | || || | | ||| ||| |||||| |||||||| | Sbjct 28630 ATCTTCTTCATTGCAAAGGCAAGGCTCAATGTAACCGCCAAAGGAAGCCCCTCTGGCACC 28689 Query 331477 CCAACGACCAGAAT 331490 |||| || | ||| Sbjct 28690 GCAACAACAACAAT 28703 >seq12522 Length=277394 Score = 84.2 bits (92), Expect = 5e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 242875 TTCCCCATCCAGTATCCGGATATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGG 242934 ||||| ||| ||| ||| || ||||| | |||||||| || | ||| | |||||| Sbjct 96392 TTCCCAGTCCGGTACCCGTCGATCTGGGAGTTCTATAAGAAAGCCGAGGCCTCGTTTTGG 96451 Query 242935 ACCACCGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGCGAGAAACTCAATGAC 242994 ||| ||||||| || ||| | |||| || | ||||| ||| | || | | | Sbjct 96452 ACCGCCGAGGAGGTCGATCTCTCCTCAGATCTCCGCCACTGGGACGAAACCCTAACCGCC 96511 Query 242995 GACGAACGTCATTTCATCAAACACATTCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTG 243054 || |||||||||||||| || |||| | ||| || || | || || ||||||||| Sbjct 96512 GATGAACGTCATTTCATATCTCATGTTCTCGCTTTCTTTGCTGCATCGGACGGTATTGTG 96571 Query 243055 ATGGAAAATCT 243065 |||| ||||| Sbjct 96572 TTGGAGAATCT 96582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102700357046550