Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosera_20capensis_20[genbank_20GCA_5F001925005.1_202016-12-30] 12,713 sequences; 263,787,800 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq11187 181 1e-40 seq7652 120 3e-22 seq11644 109 6e-19 seq12000 104 3e-17 >seq11187 Length=129436 Score = 181 bits (200), Expect = 1e-40 Identities = 438/654 (67%), Gaps = 8/654 (1%) Strand=Plus/Minus Query 48168 TTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGT 48227 ||||| || | ||||||||| ||| |||| ||| ||||| |||| |||| ||| | Sbjct 9220 TTAGG-CAAAACAATGACCATTCCACATCGTTTCA-ACTCTTTTCATGAATAGATCAAGA 9163 Query 48228 ATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTT 48286 | |||||||| ||| || | ||| | || || || || |||||| ||| | | Sbjct 9162 ACTCAAAGAGC-ATAGAAGAGATCACGAGCTCGCTCCTCCTCCTTGCCATGGTTCTTCCT 9104 Query 48287 AAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACC 48346 ||| |||||||| || | | ||||||||||||||| || || || | | | ||| Sbjct 9103 AAGATCAAGAAATTCAAGAACATCAGCATGCCATGGCTCCAAGTACACAGTAAAAGCACA 9044 Query 48347 TGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACAT 48406 || || || |||||||||| | ||| | ||||||| || | || | | ||| Sbjct 9043 TGTTCTCTTGCCTCCTCCTTGATAAACATAACGAGCAGTATCATTGAACACACACAGCAT 8984 Query 48407 TGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT 48466 || ||||| ||||| ||| | ||||| |||| | || |||||| |||| || Sbjct 8983 AGGAACAATTCCATTCGATGTGCCATTTATTCCACGTGTGTATCTTCCAGTAGCATGGAT 8924 Query 48467 ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGA--GCACACCGTTTA 48524 |||| || || | || || || || || |||| ||| | | |||||| ||| Sbjct 8923 ATTATGGATGGACACGCCAATGCCTCCGGCTGATTTACTTATCACACTGCACACTCTTTC 8864 Query 48525 AGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGAC 48584 || ||||| || ||||| || || ||||| ||| ||||| || ||| || || ||| | Sbjct 8863 AGAGTATCGTATATTCCCTCAATGCTATCCTCTTTCATACATACTAGGAAGCAGCTACTC 8804 Query 48585 ATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTC 48644 ||| || | |||||||||| | || | | ||||| || || ||||||| | Sbjct 8803 GATTGAGGTCTAGGAGTTCCTGAACTGAAGAGGTTCGGAGAAGCGTGGGTAAACCACCGC 8744 Query 48645 TCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCC-CATTGATGTATACCTAT 48703 | || | ||| | ||| |||| | || || ||||| | ||| || || || || Sbjct 8743 TGAGACATCAAATGATAAGTTTTGACCGTTGATTCGATATCATCCTTG-TGGATTCCAAT 8685 Query 48704 AGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAG 48763 || || | ||| ||||||| || ||||| || | | ||| || |||||| || Sbjct 8684 AGCAACTCTCATCAACATATGCTGTGGTCTCTCCATGACTTTCCCTCCTACTTTCAACAG 8625 Query 48764 ATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATC 48817 ||| ||| | ||||| ||||| ||||||||||| | || |||||| |||| Sbjct 8624 ATAAGATCTCTCCAAGGTTTTGAAACCAAAATAATCATAATCAAAGTCCCTATC 8571 >seq7652 Length=87983 Score = 120 bits (132), Expect = 3e-22 Identities = 242/353 (69%), Gaps = 11/353 (3%) Strand=Plus/Minus Query 18953 ACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAA 19012 ||| ||| || |||||||||||||| | |||||||| || |||| |||||||||| Sbjct 69263 ACAACAAGCAAGCAAAATCACAATGCAACCCCTCGTCCCTCGAAATCAGCTCATTAGAAA 69204 Query 19013 ATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA-AATGATCCA 19071 | | ||||| ||||||| || || || || ||||| ||||| | ||| || || Sbjct 69203 ACGCCAAACCCGGCATCAACCCCCTCTTCTTCAACCAAAATATCG-CGCAGAAACTCCCT 69145 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGC--AT 19129 || || || || ||||| || ||||| |||| | || || || | || | || Sbjct 69144 GAGAAAAAAATCCCTTCAACACAAGCAAACGCAATCAACCTCTCCGCAAAGCTCTCCGAT 69085 Query 19130 CATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCT 19189 | || |||||| ||| ||||| || |||||| | || || || || || |||| Sbjct 69084 C-----CATCAATCCACCTCATCGCCCACTCCGCCTTCCTCTTCACGCACGGTATCGTCT 69030 Query 19190 CTATAGAATTAAA-TAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAAT 19248 | | | |||| | | || ||| || |||||| | ||| | ||| ||||| Sbjct 69029 CCACCGCCCTAAACAACCTTGAT-TTCTCCTCCCCATCTTTTATATAAGTATCAATCAAC 68971 Query 19249 AAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAA 19301 | ||| ||||| || |||||||| || ||||| || |||||||| || ||||| Sbjct 68970 AGACTATACATCTCAGAATGAATGTTCTCTATCGCAATCTGAAACCCATAAAA 68918 >seq11644 Length=43201 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659 ||||||||||| || | || ||||| ||||| |||||||| || || | ||| | | Sbjct 8888 GTTCCTGAATTGAAGAGGGTCGGAGAAGCATGTGTAAACCATCGCTGAGACATCAAATGA 8947 Query 48660 TATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATACACGCATTAA 48718 || |||| || || || || ||||| | ||| || || || |||| ||| | ||| || Sbjct 8948 TAAGTTTTGATCACTGATTCGATATCATCCTTG-TGGATCCCAATAGCTACTCTCATCAA 9006 Query 48719 CATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAA 48778 ||| | || ||||| || || | ||| || |||||| ||||| ||| | ||||| Sbjct 9007 CATGTGCTGTGGTCTCTCCACCACTTTCCGTCCTACTTTCAACAGATAAGATCTCTCCAA 9066 Query 48779 TGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATT 48827 ||||| ||||||||||| | || |||||| |||||| || ||| Sbjct 9067 GGTTTTGAAACCAAAATAATCATAATCAAAGTCTCTATCATAGATTATT 9115 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48359 ACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACC 48418 ||||||||||| | ||| | |||||||| || | || | | ||| || ||||| || Sbjct 8467 ACCTCCTTGATTAACATAACGGGCAGTATCATTGAACACACGCAGCATAGGAACAATCCC 8526 Query 48419 ATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGA 48478 ||| ||| | ||||| ||||| |||||||||||| | || | || ||| || || Sbjct 8527 ATTCGATGTGCCATTTGTTCCACGTATATAACTTCCAGTGGCACGGATGTTATGGATGGA 8586 Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 | || || || || || |||| ||| | ||||| || || ||||| || || Sbjct 8587 CACGCCAATGCCTCCGGCTGATTTACTTATAACTGCACATTCCTTCAGTGTATCGTAGAT 8646 Query 48539 TCCTTCTATACTATCATCTATCAT 48562 || || || ||||||||| |||| Sbjct 8647 GCCCTCGATGCTATCATCTTTCAT 8670 >seq12000 Length=139029 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659 ||||||||||| |||| |||||||||||||| | |||||| || || | ||| | Sbjct 6007 GTTCCTGAATTGAATAGAGTTGGAGATGCATGGGTGAACCATCGCTGCGACATCAAATGG 6066 Query 48660 TATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAAC 48719 || |||| || | || || ||||| || || || || |||| || | ||| | | Sbjct 6067 TAAGTTTTGGTAGCTGACTCAATATCATGTTTGTGGATTCCGATAGCAACCCTCATCAGC 6126 Query 48720 ATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAAT 48779 || | ||| ||||||||||||| ||| | |||||| ||||| || | |||| | Sbjct 6127 ATGTGTTGTGGTCTTTCAACAACTTTCCCTCCCACTTTCAACAGATAAGACCTCTCCAGT 6186 Query 48780 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAAT 48826 ||||| |||||||| || | || |||||| | |||| ||| || Sbjct 6187 GTTTTGAAACCAAAGTAATCATAGTCAAAGTCCCTGTCATAAATTAT 6233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562019473885320