Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosera_20capensis_20[genbank_20GCA_5F001925005.1_202016-12-30] 12,713 sequences; 263,787,800 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq9675 104 5e-17 seq8649 95.1 2e-14 seq10718 91.5 3e-13 seq7652 84.2 4e-11 >seq9675 Length=46304 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | || || | || | ||| | ||||| ||| || ||||||||||||| Sbjct 43128 ATACCACCACGGAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATATTATAATCA 43069 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| |||| || || |||||||| || |||| ||| ||||| || Sbjct 43068 GCAAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAAATCAATCGCTGCTGATCTGGA 43009 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| || || || || || || || ||||| || | ||| || || Sbjct 43008 GGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATGGTATCCGAGCTCTCA 42949 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || || || |||||||| || || | ||| |||||||| Sbjct 42948 ACTTCAAGGGTGATAGTCTTGCCAGTTAAAGTCTTCACAAAAATCTGCAT 42899 Score = 89.7 bits (98), Expect = 1e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 192333 ATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTG 192392 ||| | ||| | ||| || ||||||||| |||| | || || |||| || | || Sbjct 43330 ATGGAGAGTGGACTCCTTCTGGATATTATAGTCAGCGAGGGTGCGGCCATCTTCGAGCTG 43271 Query 192393 TTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTT 192452 |||||||||||||| | |||||| ||||||||||| || ||||| || || || || || Sbjct 43270 CTTACCAGCAAAGATGAGTCTCTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGAATCTT 43211 Query 192453 ATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512 ||| | ||| || | ||||| || |||| || || || || || ||||| Sbjct 43210 TGCTTTCAAGTTATCAATTGTGTCTGAGCTCTCGGCTTCAAGGGTGATTGTCTTGCCAGT 43151 Query 192513 TAATGTTTTAATAAATATCTGCAT 192536 | || || | ||| |||||||| Sbjct 43150 GAGAGTCTTCACAAAGATCTGCAT 43127 Score = 84.2 bits (92), Expect = 4e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||| | | |||| ||| | || | ||| || || || ||||| Sbjct 43584 ATCCCACCACGAAGCCTGAGCACTAGATGAAGGGTGGACTCCTTCTGTATGTTGTAATCC 43525 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | || || |||||||| || | ||||| ||||| || Sbjct 43524 GCCAAGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAATATCAGCCTCTGCTGATCTGGG 43465 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || ||||| || || ||||| || | |||||| ||| Sbjct 43464 GGAATCCCCTCCTTGTCCTGTATCTTTGCCTTGACATTGTCAATCGTATCTGAGCTTTCA 43405 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || ||||||||||| || || || | || |||| ||| ||||||||| Sbjct 43404 ACCTCAAGAGTAATGGTCTTTCCCGTGAGGGTCTTAACAAAGATCTGCATT 43354 >seq8649 Length=19160 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || || |||| || ||||| | || ||||| || || ||||||||||| | || Sbjct 6395 ATGTTGTAGTCAGCTAGGGTTCGCCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGCCTT 6336 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||||||||| || || || || ||||| || || ||| || ||| |||| Sbjct 6335 TGCTGATCAGGTGGGATGCCCTCCTTGTCTTGAATCTTTGCTTTCACGTTATCAATAGTG 6276 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| || ||||| ||||| || || || ||||| | || || | ||| |||||| Sbjct 6275 TCTGAGCTCTCCACTTCAAGAGTGATTGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGC 6216 Query 192535 AT 192536 || Sbjct 6215 AT 6214 >seq10718 Length=202232 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| || || ||||| | || | ||| || ||| || || ||| Sbjct 180059 ATCCCACCACGGAGACGCAACACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCA 180118 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || | || || | || || ||||||||||| | ||||| ||||| ||| Sbjct 180119 GCAAGGGTGCGACCTTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGT 180178 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| || || || || || || | ||| || ||| Sbjct 180179 GGGATGCCCTCCTTATCTTGGATCTTGGCCTTCACGTTGTCAATGGTATCAGAGCTCTCT 180238 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || |||||||| || ||||| || || || | ||| |||||||| Sbjct 180239 ACCTCGAGGGTAATGGTCTTCCCAGTCAAGGTCTTCACAAAAATCTGCAT 180288 >seq7652 Length=87983 Score = 84.2 bits (92), Expect = 4e-11 Identities = 115/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 49813 CATATATTAAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTAC 49872 |||| | || || ||||||||| ||| || ||||||||||| || || | |||||| Sbjct 69266 CATACAACAAGCAAGCAAAATCACAATGCAACCCCTCGTCCCTCGAAATCAGCTCATTAG 69207 Query 49873 TAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA-AAACTA 49931 ||| | || || ||||| || || ||||| || | ||||||||| | ||| ||||| Sbjct 69206 AAAACGCCAAACCCGGCATCAACCCCCTCTTCTTCAACCAAAATATCG-CGCAGAAACTC 69148 Query 49932 CTAGAAAAGAATATACCCTCGACACACGCAAATGCTAT 49969 | || || || || || || ||||| ||||| || || Sbjct 69147 CCTGAGAAAAAAATCCCTTCAACACAAGCAAACGCAAT 69110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984319642667550