Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosera_20capensis_20[genbank_20GCA_5F001925005.1_202016-12-30] 12,713 sequences; 263,787,800 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq6077 120 4e-22 seq12572 114 2e-20 seq866 111 2e-19 seq12300 107 2e-18 seq11355 96.9 4e-15 seq11187 93.3 5e-14 >seq6077 Length=60585 Score = 120 bits (132), Expect = 4e-22 Identities = 277/410 (68%), Gaps = 13/410 (3%) Strand=Plus/Minus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACC--TGTTTCATTATCAA 9614 ||||| || || | | ||| || || ||||| || | | ||| |||||| | ||| Sbjct 20572 TCAAGAATGTCTGCTCTATTTGTTGCTGCGATCACGATGACACCGGTGTTTCCCT--CAA 20515 Query 9615 AACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 9674 |||| |||||||| |||||||| ||||||| || ||||| | ||||||||| || Sbjct 20514 AACCGTCCATCTCGGTCAAAAGCTGGTTAAGGGTCTGTTCTCTTTCATCATTTCCTCC-- 20457 Query 9675 TACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 9731 |||| |||| || | ||| | || || |||||||||||||||| ||||| |||| Sbjct 20456 -ACCAATGCCAGTACCTCTTTGTCTCCCAACAGCATCAATCTCATCAACAAAGACAATGC 20398 Query 9732 ATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 9791 | || || || || | || ||||| || || | || |||||||||| Sbjct 20397 ACGGAGCGTTCTCCTTTGCTTTCTTGAACAGATCACGAACCCTGGAAGCACCCACACCAA 20338 Query 9792 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 9850 |||||||||| || || | | | ||| || | || ||||| ||| || |||||| Sbjct 20337 CAAACATCTCGACGAACTCAGAACCAGAA-ATGGAGAAAAAGGGAACACCAGCTTCACCA 20279 Query 9851 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 9910 ||||| || || | || ||||| || || || || ||| |||| || ||||| Sbjct 20278 GCAATAGCCTTTGCCAACAGTGTCTTTCCTGTTCCAGGAGGACCGACGAGAAGAACACCT 20219 Query 9911 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTT-AAGAA 9959 |||||| || ||| || | ||||||| |||| ||| ||||| Sbjct 20218 TTAGGAATCCGAGCACCAACAGCAGTGAATCTCTCTGGTTTCTTCAAGAA 20169 >seq12572 Length=293854 Score = 114 bits (126), Expect = 2e-20 Identities = 196/282 (70%), Gaps = 12/282 (4%) Strand=Plus/Plus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 || ||||||||||| ||||| || || ||||| || ||||||| |||||||| | | Sbjct 176884 AACCCATCCATCTCAGTCAAGAGCTGATTAATTGTCTGTTCCCTCTCATCATTTCCACCC 176943 Query 9674 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733 | || || | | |||| | |||||||||||||||||||||||||| || ||||| Sbjct 176944 CCAAGCCCCGCCCCTCTTTGCCTACCCACGGCATCAATCTCATCAATGAACACAATGCAA 177003 Query 9734 GG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC--ACA 9787 || ||| | || || | ||||| | ||||| ||| || | ||||| || Sbjct 177004 GGAGCCTTGCTCTTTGCCTTC----TCAAACAAATCCC--TCACCCTAGACGCCCCAACC 177057 Query 9788 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 9847 || ||||||| ||| ||||| | | || | ||| || ||| || || | || ||| Sbjct 177058 CCGACAAACAACTCAACAAACTCAGACGCAGCACAAGAGAAGAACGGCACCTCAGCTTCT 177117 Query 9848 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9889 ||||||| || | || | ||| ||||| || || || ||| Sbjct 177118 CCCGCAACAGCCCTCGCCAAAAGGGTCTTCCCTGTCCCGGGC 177159 >seq866 Length=26815 Score = 111 bits (122), Expect = 2e-19 Identities = 275/413 (67%), Gaps = 6/413 (1%) Strand=Plus/Minus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACC--TGTTTCATTATCAA 9614 ||||| || || | | ||| || || ||||| |||| | ||| |||||| | | | Sbjct 19706 TCAAGAATGTCTGCTCTATTTGTTGCTGCGATCACAATGACACCGGTGTTTCCCT--CGA 19649 Query 9615 AACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 9674 |||| |||||||| |||||||| ||||||| || ||||| | ||||||||| || Sbjct 19648 AACCGTCCATCTCGGTCAAAAGCTGGTTAAGGGTCTGTTCTCTTTCATCATTTCCTCCAC 19589 Query 9675 TACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 9734 | ||||| || | || | || || |||||||||||||| | ||||| ||||| | Sbjct 19588 CAATACCAGTACCTCTCTGTCTCCCAACAGCATCAATCTCATCCACAAAGACAATGCACG 19529 Query 9735 GTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAA 9794 | || || || | || ||||| || || | || ||||||||||||| Sbjct 19528 GAGCGTTCTCCTTTGCTTTCTTGAACAGATCACGAACCCTGGAAGCACCCACACCAACAA 19469 Query 9795 ACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCA 9853 ||||||| || || | | | ||| || | || ||||| ||| || |||||| ||| Sbjct 19468 ACATCTCGACGAACTCGGAACCAGAA-ATGGAGAAAAAGGGAACACCAGCTTCACCAGCA 19410 Query 9854 ATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGT 9913 || || || || || ||||| || || || || || |||| || ||||| Sbjct 19409 ATAGCCTTTGCCAGTAGCGTCTTTCCTGTTCCAGGAGGGCCGACGAGAAGAACACCTTTA 19350 Query 9914 GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966 |||||| || ||| || | | ||||| |||| ||| | || ||||| Sbjct 19349 GGAATCCGAGCACCAACAGCAGTGAACCTCTCTGGTTTCTTCAAGAACTCCAC 19297 >seq12300 Length=20866 Score = 107 bits (118), Expect = 2e-18 Identities = 248/370 (67%), Gaps = 14/370 (4%) Strand=Plus/Plus Query 9526 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9585 ||||||||| || || | ||| | || ||||||| || ||| ||||| || || || Sbjct 15776 ATCAAAGCGTCCCGGCCTAAGCAAGGCAGCATCAAGAATTTCAGGCCGATTTGTGGCTGC 15835 Query 9586 GATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAAT 9645 | ||||| | || | | | | ||||||||||||||||| | |||||||| | Sbjct 15836 AAGGACAATGACGCCACCATTACTTTTGAAACCATCCATCTCTGTAAGTAGTTGGTTCAA 15895 Query 9646 AGTTTGTTCCCGTTCATCATTCGCTGGCATACCACC---AGCACT---GCGTTGCTTTCC 9699 ||||| |||| ||||||||| || ||||| | |||| | |||| |||| Sbjct 15896 CGTTTGCTCCCTCTCATCATTCCCT------CCACCTATATCACTTCCTCTTTGCCTTCC 15949 Query 9700 CACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAA 9759 ||| || || |||||||||||||| || | || || ||| | || | || Sbjct 15950 CACAGCGTCGATCTCATCAATGAAAACCAAACACGGGGAATTCTTCTTTGCCTTGTTGAA 16009 Query 9760 GAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9819 ||||| || || || || ||||| |||||||| ||||| ||||| | | | | Sbjct 16010 TAGATCTCGAACCCGTGATGCTCCCACTCCAACAAAAATCTCAACAAATTCAGATCCAG- 16068 Query 9820 ACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTAC 9878 | |||| || ||| || || | |||||| || ||||| ||| || || ||||| | Sbjct 16069 ATATTGAGAAGAATGGAACTCCTGCTTCACCTGCTATGGCCTTGGCAAGCAGTGTCTTGC 16128 Query 9879 CCGTACCTGG 9888 |||| || || Sbjct 16129 CCGTCCCAGG 16138 >seq11355 Length=43312 Score = 96.9 bits (106), Expect = 4e-15 Identities = 229/341 (67%), Gaps = 15/341 (4%) Strand=Plus/Plus Query 9555 CATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAA 9614 |||||||||| ||| ||||| || || || | ||||| || || | | | | | Sbjct 41285 CATCAAGGATTTCAGGCCGATTTGTGGCTGCAAGGACAATGATGCCACCATTACTTTTGA 41344 Query 9615 AACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 9674 |||||||||||||||| | |||||||| | ||||| |||| ||||||||| || Sbjct 41345 AACCATCCATCTCTGTAAGTAGTTGGTTCAACGTTTGCTCCCTCTCATCATTCCCT---- 41400 Query 9675 TACCACC---AGCACT---GCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGA 9728 ||||| | |||| | |||| ||||||| || || ||| |||||||||| || | Sbjct 41401 --CCACCTATATCACTTCCTCTTTGCCTTCCCACAGCGTCGATCACATCAATGAA-ACCA 41457 Query 9729 TGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACAC 9788 || || ||| | || | || ||||| || || || || ||||| | Sbjct 41458 AACACGGGGAATTCTTCTATGCCTTGTTGAACAGATCTCGAACCCGTGATGCTCCCACTC 41517 Query 9789 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCA 9847 ||||||| ||||| ||||| | | | | | |||| || ||| || || | |||| Sbjct 41518 CAACAAAAATCTCAACAAATTCAGATCCAG-ATATTGAGAAGAATGGAACTCCTGCTTCA 41576 Query 9848 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 || || ||||| ||| || || ||||| ||||| || || Sbjct 41577 CCTGCTATGGCCTTGGCAAGCAGTGTCTTGCCCGTCCCAGG 41617 >seq11187 Length=129436 Score = 93.3 bits (102), Expect = 5e-14 Identities = 232/348 (67%), Gaps = 7/348 (2%) Strand=Plus/Plus Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569 || || | |||||| ||| |||| ||| |||| ||||| | || || || | || Sbjct 8948 CGTGGAATAAATGGCACATCGAATGGAATTGTTCCTATGCTGTGTGTGTTCAATGATACT 9007 Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTC---GAAAGGGATCTATCGCAGTCTATCTTGAG 104626 || || ||||| |||||| || | ||| | || | | || || | ||| Sbjct 9008 GCTCGTTATGTTTATCAAGGAGGAGGCAAGAGAACATGTGCTTTTACTGTGTACTTGGAG 9067 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686 |||||||| || ||| | | || || ||||| | | ||||| || | |||||| Sbjct 9068 CCATGGCATGCTGATGTTCTTGAATTTCTTGATCTTAGGAAGAACCATGGCAAGGAGGAG 9127 Query 104687 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 104746 | ||| || |||||||||| ||||| || ||| ||||| |||||||| |||||| Sbjct 9128 GAGCGAGCTCGTGATCTCTTCTATGCTCTTTGAGTTCTTGATCTATTCATGAAAAGAGTT 9187 Query 104747 GAGGAGA-GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGC 104805 || || |||| | ||||| | ||||| | | | |||| || ||||| | || | Sbjct 9188 GAAACGATGTGG--AATGGTCATTGTTTTGCCTAAATGAGGC-CCGGGTCTGGCAGACGT 9244 Query 104806 CGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGG 104853 |||||| |||||||||| || |||| ||||| || |||| || Sbjct 9245 TTGGGGTGAAGAGTTTGAAGAACTATACAGGAAGTATGAACAAGAGGG 9292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583168112568120