Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosera_20capensis_20[genbank_20GCA_5F001925005.1_202016-12-30] 12,713 sequences; 263,787,800 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq8649 93.3 4e-14 seq9675 89.7 4e-13 seq10236 84.2 2e-11 seq386 82.4 7e-11 >seq8649 Length=19160 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| ||| || || ||| ||||| || || ||||| ||||| || || | || ||| Sbjct 5738 ACCAGATGGAGAGTTGACTCCTTTTGAATGTTGTAATCAGCAAGCGTGCGGCCATCTTCA 5679 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||||||||| ||||| || |||||||||||||| | ||| | | ||| ||||| | Sbjct 5678 AGCTGTTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGG 5619 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || |||| | | | || || ||| || || | ||||| | || Sbjct 5618 ATCTTGGTCTTGACATTGTCGATTGTGTCAGAACTCTCAACCTCGAGAGTGATTGTCTTG 5559 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || || || || ||||| ||||||||||||| Sbjct 5558 CCTGTGAGAGTCTTAACGAAGATTTGCATCT 5528 >seq9675 Length=46304 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| |||||| || || |||||||||||||| || || |||| || ||||| Sbjct 44241 TGCAGGGTGGACTCTTTCTGAATGTTATAATCGGCAAGGGTGCGACCGTCCTCCAGCTGC 44182 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || ||||| || || | ||||||||| | || | || ||| || | | ||| | | Sbjct 44181 TTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGCGGGATGCCCTCCTTATAC-TGAATCTT 44123 Query 39202 TGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCC 39257 || | ||| | | | || || ||| |||||| |||| |||||| | ||||| Sbjct 44122 GGTCTTCACGTTGTCGATGGTGTCCGAGCT---CTCCACTTCCAGCGTGATGGTCTTTCC 44066 Query 39258 CGTCAGCGTTTTAACAAAGATTTGCATC 39285 || || || || |||||||| |||||| Sbjct 44065 GGTGAGGGTCTTCACAAAGATCTGCATC 44038 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| ||| || || |||||||| || || ||||| ||||| || || | || ||| Sbjct 42651 ACCAGATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGCAAGGGTGCGGCCATCTTCA 42592 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 |||||||| || ||||| || |||||||||||||| | ||| | | ||| || || | Sbjct 42591 AGCTGTTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTATCTTGG 42532 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || |||| ||| | | | || || ||| || || | ||||| | || Sbjct 42531 ATCTTGGTCTTGA-CGTTGTCTATTGTGTCAGAACTCTCGACCTCGAGAGTGATTGTCTT 42473 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || || || || ||||| ||||||||||||| Sbjct 42472 GCCTGTGAGAGTCTTAACGAAGATTTGCATCT 42441 >seq10236 Length=157466 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/222 (69%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || || || || || || | Sbjct 67392 GCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTGCGGCC 67451 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || || || ||||| ||||| || |||||||||||||| | ||| | || || || Sbjct 67452 GTCCTCGAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCTTCCTT 67511 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCG 39244 |||| ||| || |||| ||| | | | || || ||| |||||| || | | Sbjct 67512 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAGCT---CTCCACCTCGAGGG 67567 Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 |||| | || || || ||||| || |||||||| ||||||| Sbjct 67568 TGATCGTCTTGCCGGTGAGCGTCTTCACAAAGATCTGCATCT 67609 >seq386 Length=19993 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | ||| || ||| ||| ||||| || ||||| || ||||| || || | Sbjct 3232 GCGGAGCACAAGATGAAGGGTGGACTCCTTTTGAATGTTATAGTCAGCAAGGGTGCGGCC 3173 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTT 39187 || || ||||| || || ||||| || | | ||||||||| |||||| | | ||| | Sbjct 3172 ATCCTCGAGCTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGG-ATACCCTCCT 3114 Query 39188 TGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 | ||| ||||||| || | | | | |||||| |||||| || | |||| Sbjct 3113 TATCCTGGATTTTCGCCTTCACATTGTCAATCGTATCAGAACTCTCCACCTCGAGGGTGA 3054 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | || || || || || || || ||||||||||| Sbjct 3053 TAGTCTTGCCAGTTAGGGTCTTGACGAAGATTTGCAT 3017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429479046338969