Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq84028 91.5 1e-13 >seq84028 Length=6065 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 |||||||| || || ||||| ||||||||||| || | | ||||||| | ||| Sbjct 3380 TGAAGGGTCGACTCCTTTTGGATGTTGTAATCAGCGAGGGTGCGGCCGTCTTCGAGTTGC 3321 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || ||| | || | | ||| ||||| ||||| || |||||||| |||||| Sbjct 3320 TTCCCCGCGAAGATGAGCCTTTGCTGGTCCGGAGGAATGCCCTCTTTGTCTTGGATTTTG 3261 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||||| | || ||||| ||| |||| || || | ||| || || || || || Sbjct 3260 GCTTTTACGTTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATCGTCTTGCCAGTG 3201 Query 15341 AGAGTTTTTACAAAAATTTGCATATTTGAAAATAAAAT 15378 || ||||| ||||| || ||||| | || ||| || || Sbjct 3200 AGGGTTTTCACAAAGATCTGCATCTGTGTAAAGAACAT 3163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361706895687000