Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06]
107,000 sequences; 660,509,584 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq78223 84.2 2e-11
>seq78223
Length=3817
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059
||||| || || || || || || || ||||||||||| ||| |||| ||| |||
Sbjct 2011 ACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCAGCCAGAGTTCGGCCATCCTCC 2070
Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119
|| || || || ||| | || | |||||| ||||| || | ||||| || || |
Sbjct 2071 AACTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCTTGA 2130
Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGT-TCCGTTTCCACGGTAATGGTTTT 20178
|| ||| |||||| | ||| | ||| || | || |||| ||| ||||| ||
Sbjct 2131 ATCTTTGCTTTCACATTATCAATGGTGTCG-GAGCTCTCAACCTCCAGGGTGATGGTCTT 2189
Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|| |||||||| ||||||||||| |||||
Sbjct 2190 TCCAGTCAACGTCTTGACAAAAATCTGCAT 2219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419040032067000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |