Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq78223 84.2 2e-11 >seq78223 Length=3817 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || || || || || || || ||||||||||| ||| |||| ||| ||| Sbjct 2011 ACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAATCAGCCAGAGTTCGGCCATCCTCC 2070 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 || || || || ||| | || | |||||| ||||| || | ||||| || || | Sbjct 2071 AACTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCTTGA 2130 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGT-TCCGTTTCCACGGTAATGGTTTT 20178 || ||| |||||| | ||| | ||| || | || |||| ||| ||||| || Sbjct 2131 ATCTTTGCTTTCACATTATCAATGGTGTCG-GAGCTCTCAACCTCCAGGGTGATGGTCTT 2189 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || |||||||| ||||||||||| ||||| Sbjct 2190 TCCAGTCAACGTCTTGACAAAAATCTGCAT 2219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419040032067000