Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq78223 91.5 1e-13 seq64505 87.8 2e-12 >seq78223 Length=3817 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||||||||| ||| | || ||||| ||||| ||| | || ||| | | Sbjct 2219 ATGCAGATTTTTGTCAAGACGTTGACTGGAAAGACCATCACCCTGGAGGTTGAGAGCTCC 2160 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || ||| ||| ||| ||||| ||||| |||| |||||| Sbjct 2159 GACACCATTGATAATGTGAAAGCAAAGATTCAAGATAAGGAAGGGATCCCACCGGATCAG 2100 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || | || | ||| || || || || || |||| | ||| |||| ||||| ||| Sbjct 2099 CAGAGGTTGATCTTTGCCGGAAAGCAGTTGGAGGATGGCCGAACTCTGGCTGATTACAAC 2040 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGA 115513 ||||| || ||||| || | || |||| | | |||| |||||| Sbjct 2039 ATTCAGAAGGAGTCGACGCTGCACTTGGTTCTCCGTCTGCGTGGAGGA 1992 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| ||||| ||||| || || || || ||| | || || | Sbjct 2447 ATGCAGATCTTTGTGAAAACCCTCACTGGCAAGACAATCACCCTTGAGGTCGAAAGCTCA 2388 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || || || || ||||| |||||| ||||| || || Sbjct 2387 GACACCATTG-ACAACGTTAAGGCCAAGATCCAAGATAAGGAAGGCATCCCCCCAGACCA 2329 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||||||||| | ||| ||||| || | || |||| || | || || ||||| Sbjct 2328 GCAAAGACTTATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTTGCAGACTATAA 2269 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||||| |||||||||||| |||| ||||| Sbjct 2268 CATTCAGAAAGAGTCTACTCTACACTTGGTG 2238 >seq64505 Length=10574 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 || |||||||| |||| |||||| || || | |||| ||||||||||||| | ||| Sbjct 3929 GACAAAGAAGGGATCCCACCTGATCAACAGAGGTTGATTTTTGCGGGCAAACAACTTGAA 3870 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | |||| | || || || |||||||| || ||||| ||| | ||| | || || Sbjct 3869 GATGGCCGAACCCTTGCGGACTACAACATTCAGAAGGAGTCGACTCTTCATCTTGTTCTG 3810 Query 115499 AGATTGCGAGGAGGAA 115514 || | ||||||||| Sbjct 3809 AGGCTCAGAGGAGGAA 3794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424789324840000