Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq21431 95.1 8e-15 >seq21431 Length=3066 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || || ||||| || | ||| || || || ||||||||||| || | || || Sbjct 602 CGGAGAACCAAGTGAAGAGTAGACTCCTTCTGAATATTATAATCTGCAAGGGTTCGACCA 543 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || |||||||| |||||| |||| || || | ||||||||||| || | || || || Sbjct 542 TCATCCAATTGCTTCCCGGCAAAGATCAACCTCTGCTGATCCGGTGGGATCCCCTCCTTA 483 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || ||||||| || | | | | ||| || | ||| ||||| || | |||||| Sbjct 482 TCCTGTATTTTTGCCTTCACATTGTCAATTGTATCAGAGCTCTCCACCTCAAGAGTAATG 423 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || || || ||||| || || |||||||| Sbjct 422 GTTTTCCCAGTCAAGGTTTTCACAAATATCTGCAT 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346916608331000