Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq88716 120 4e-21 seq24040 120 4e-21 >seq88716 Length=16829 Score = 120 bits (132), Expect = 4e-21 Identities = 145/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 869687 ACTTGGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCG 869746 || |||||||| ||||||||| || || |||||||| ||||| || || |||| Sbjct 16450 ACCTGGACCTCGGTCATGAACCTTCCCGCGAGGTTCTCAAGGACGATCCCATCCGAGGCG 16509 Query 869747 GCGAAAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACAC---C 869803 || ||||| || |||||||| |||||||| ||| || | | | || | | | Sbjct 16510 GCAAAAAATGCAAGGACGTGACAAATAAAGTGCTTCTCATCTTTGGTCAGGGCTTCGTCC 16569 Query 869804 CAGTGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCC 869863 || ||| | |||| | |||||| |||||||| || ||||||| ||||||||||||| Sbjct 16570 CAATGGCGGATGTCAACAGAGAGGTCAACCTCCTCAGCAGTCCAGAACGAGGCCTCGGCC 16629 Query 869864 TTTTTGTACATCTCCCA 869880 || |||||||||||||| Sbjct 16630 TTCTTGTACATCTCCCA 16646 >seq24040 Length=12015 Score = 120 bits (132), Expect = 4e-21 Identities = 145/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 869687 ACTTGGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCG 869746 || |||||||| ||||||||| || || |||||||| ||||| || || |||| Sbjct 5562 ACCTGGACCTCGGTCATGAACCTTCCCGCGAGGTTCTCAAGGACGATCCCATCCGAGGCG 5621 Query 869747 GCGAAAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACAC---C 869803 || ||||| || |||||||| |||||||| ||| || | | | || | | | Sbjct 5622 GCAAAAAATGCAAGGACGTGACAAATAAAGTGCTTCTCATCTTTGGTCAGGGCTTCGTCC 5681 Query 869804 CAGTGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCC 869863 || ||| | |||| | |||||| |||||||| || ||||||| ||||||||||||| Sbjct 5682 CAATGGCGGATGTCAACAGAGAGGTCAACCTCCTCAGCAGTCCAGAACGAGGCCTCGGCC 5741 Query 869864 TTTTTGTACATCTCCCA 869880 || |||||||||||||| Sbjct 5742 TTCTTGTACATCTCCCA 5758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6098358278919000