Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06]
107,000 sequences; 660,509,584 total letters
Query= NC_028834.1
Length=48216
Score E
Sequences producing significant alignments: (Bits) Value
seq104618 80.6 8e-11
seq102940 80.6 8e-11
seq101322 80.6 8e-11
seq101262 80.6 8e-11
seq91943 80.6 8e-11
seq87979 80.6 8e-11
seq81057 80.6 8e-11
seq80558 80.6 8e-11
seq76232 80.6 8e-11
seq74228 80.6 8e-11
seq42471 80.6 8e-11
seq42296 80.6 8e-11
seq38947 80.6 8e-11
seq38946 80.6 8e-11
seq38915 80.6 8e-11
seq38869 80.6 8e-11
seq19634 80.6 8e-11
seq19567 80.6 8e-11
seq5754 80.6 8e-11
seq3363 80.6 8e-11
>seq104618
Length=130601
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 100681 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 100740
Query 36341 C 36341
|
Sbjct 100741 C 100741
>seq102940
Length=65138
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 35218 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 35277
Query 36341 C 36341
|
Sbjct 35278 C 35278
>seq101322
Length=108829
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 78909 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 78968
Query 36341 C 36341
|
Sbjct 78969 C 78969
>seq101262
Length=101394
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 71474 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 71533
Query 36341 C 36341
|
Sbjct 71534 C 71534
>seq91943
Length=63793
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 33873 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 33932
Query 36341 C 36341
|
Sbjct 33933 C 33933
>seq87979
Length=110252
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 83768 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 83827
Query 36341 C 36341
|
Sbjct 83828 C 83828
>seq81057
Length=52612
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 29921 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 29862
Query 36341 C 36341
|
Sbjct 29861 C 29861
>seq80558
Length=94604
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 29921 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 29862
Query 36341 C 36341
|
Sbjct 29861 C 29861
>seq76232
Length=63856
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 33936 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 33995
Query 36341 C 36341
|
Sbjct 33996 C 33996
>seq74228
Length=60457
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 30537 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 30596
Query 36341 C 36341
|
Sbjct 30597 C 30597
>seq42471
Length=34782
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 4862 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 4921
Query 36341 C 36341
|
Sbjct 4922 C 4922
>seq42296
Length=101542
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 29921 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 29862
Query 36341 C 36341
|
Sbjct 29861 C 29861
>seq38947
Length=113580
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 29921 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 29862
Query 36341 C 36341
|
Sbjct 29861 C 29861
>seq38946
Length=64232
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 29921 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 29862
Query 36341 C 36341
|
Sbjct 29861 C 29861
>seq38915
Length=75649
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 29921 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 29862
Query 36341 C 36341
|
Sbjct 29861 C 29861
>seq38869
Length=37793
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 29921 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 29862
Query 36341 C 36341
|
Sbjct 29861 C 29861
>seq19634
Length=120118
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 29921 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 29862
Query 36341 C 36341
|
Sbjct 29861 C 29861
>seq19567
Length=116744
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 83759 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 83818
Query 36341 C 36341
|
Sbjct 83819 C 83819
>seq5754
Length=95696
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 65776 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 65835
Query 36341 C 36341
|
Sbjct 65836 C 65836
>seq3363
Length=72975
Score = 80.6 bits (88), Expect = 8e-11
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 36282 AGGATTCGAACCTAGGACCCTCTGCTCCCAAAGCAGATGCGCTG-CCAGACTGCGCTACA 36340
|||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||
Sbjct 29921 AGGATTCGAACCTATGGCCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCGCTACA 29862
Query 36341 C 36341
|
Sbjct 29861 C 29861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 153973708252000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |