Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq43607 89.7 4e-13 seq43534 89.7 4e-13 >seq43607 Length=12364 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| ||||||| | ||| || | |||||| || || ||||||||| Sbjct 5680 TGAGCAATCATGCATGTCAAAAGGGAGTAAGATGCAATATTAAATGGCACTCCCAGACCC 5621 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || |||| ||| |||| ||| || || ||||| || || || || |||||||| Sbjct 5620 ATGTCAGCAGATCGCTGATACATTTGACATGACAGCTCACCATTGGCTACGTAAAACTG 5562 >seq43534 Length=7047 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| ||||||| | ||| || | |||||| || || ||||||||| Sbjct 5057 TGAGCAATCATGCATGTCAAAAGGGAGTAAGATGCAATATTAAATGGCACTCCCAGACCC 4998 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || |||| ||| |||| ||| || || ||||| || || || || |||||||| Sbjct 4997 ATGTCAGCAGATCGCTGATACATTTGACATGACAGCTCACCATTGGCTACGTAAAACTG 4939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413936296348000