Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq20 89.7 5e-13 >seq20 Length=956477 Score = 89.7 bits (98), Expect = 5e-13 Identities = 190/284 (67%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 16493 CTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCC 16552 |||||||| || ||||||||||| || || || ||||| || || |||||| || || Sbjct 871034 CTGTACATCTCGGAGTGTATGTTTTCGATTGCGATCTGGAAACCGTAGAAGGCGCGGGCT 871093 Query 16553 TCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612 |||| || || || ||| || ||| | || ||||| || ||||| ||||| Sbjct 871094 TCCGAGATCTGCACCTCCTTCATGAAGCGTCCGGCTAGGTTTTCCAGGACGATGCCGTCG 871153 Query 16613 CTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATA 16672 || || || || |||| | ||| || ||||||| || ||||| | | || | Sbjct 871154 GAGGCGGCGAAGAAGGCCAGAACGTGTTTGATGAAATGCTTCTCGTCGGTGGATAGGGTT 871213 Query 16673 TGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACT 16732 | ||| | | || | ||| | ||| ||||| || | ||||| ||| || | Sbjct 871214 TCCCAGTGGCGGAGGTCCTGGGACAAATCGACTTCCTCGGCGGTCCAGAAGGAGGCTTCG 871273 Query 16733 GCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776 |||||||| ||||| | |||||| | |||||| || ||||| Sbjct 871274 GCCTTTTTGTACATCTCCCAAATTTGTGGGTATTGAATTGGAAA 871317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511400259391840