Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq582 120 3e-22 seq310 113 5e-20 seq1 113 5e-20 seq2135 109 6e-19 seq149 104 3e-17 seq2167 96.9 4e-15 seq848 86.0 7e-12 seq2140 82.4 9e-11 >seq582 Length=2128859 Score = 120 bits (132), Expect = 3e-22 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 291123 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAA 291064 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 ||||||| ||||||||| | || | || |||||||||| ||| |||| | |||| || Sbjct 291063 GATGAGTCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATTTTGGCCTTGA-CG 291006 Query 43111 TCGCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | || | ||||| |||||| |||| ||||| || || || || || ||||| Sbjct 291005 TTGTCAATGGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTTTCCGGTGAGGGTCTTC 290946 Query 43170 ACAAAGATTTGCAT 43183 || ||||||||||| Sbjct 290945 ACGAAGATTTGCAT 290932 Score = 104 bits (114), Expect = 3e-17 Identities = 154/213 (72%), Gaps = 9/213 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||| || || || || Sbjct 298039 CTCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGACCGTCTTCAAGCTGTTTGCCGGCAAA 297980 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 297979 GATGAGCCTCTGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGT 297921 Query 43112 CGCC-ACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| ||| |||||| |||| |||||||||||||| || || || | Sbjct 297920 TGTCGATGGTGTCTGAGCT---TTCCACCTCGAGGGTGATGGTTTTGCCGGTGAGAGTTT 297864 Query 43168 TTACAAAGATTTGCATTTTTACGCCGAATACAA 43200 | |||||||| ||||| | ||| | ||||||| Sbjct 297863 TCACAAAGATCTGCATCTGTACATC-AATACAA 297832 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| || || || || || | || || ||||| || || || || Sbjct 290895 CTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGTTTGCCGGCAAA 290836 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | |||||||| | || | | ||||| ||| |||||| |||| ||| Sbjct 290835 GATGAGCCTTTGCTGGTCCGGGGGAATTCCTTCCTTATCCTGGATTTTGGCCTTGA-CGT 290777 Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| |||||| || | |||||||| ||||| || || || || | Sbjct 290776 TGTCGATTGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCA 290717 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 290716 CGAAGATTTGCAT 290704 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| || ||||| |||| | || || | ||||||||| || || Sbjct 292263 CTCCTTCTGGATATTGTAGTCGGCCAGGGTCCTTCCATCCTCCAACTGCTTACCGGCAAA 292204 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 || | | ||||||||| | || | | |||||| ||| ||| | || | || | Sbjct 292203 GATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTATCC-TGAATCTTGGCCTTCACAT 292145 Query 43111 TCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| ||| ||||| || | |||||||| ||||| || | |||| Sbjct 292144 TATCGATGGTGTCGGAGCTC---TCCACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTCT 292088 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||||||||| Sbjct 292087 TGACAAAGATTTGCAT 292072 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| || ||||| |||| | || || | ||||||||| || || Sbjct 299635 CTCCTTCTGGATATTGTAGTCGGCCAGGGTCCTTCCATCCTCCAACTGCTTACCGGCAAA 299576 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 || | | ||||||||| | || | | |||||| ||| ||| | || | || | Sbjct 299575 GATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTATCC-TGAATCTTGGCCTTCACAT 299517 Query 43111 TCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | |||||| ||| ||||| || | |||||||| ||||| || | |||| Sbjct 299516 TATCGATGGTGTCGGAGCTC---TCCACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTCT 299460 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||||||||| Sbjct 299459 TGACAAAGATTTGCAT 299444 >seq310 Length=2395884 Score = 113 bits (124), Expect = 5e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 613349 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAGCTGCTTTCCGGCGAA 613408 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | || ||||||||| ||| || || | ||| Sbjct 613409 GATGAGCCGCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 613467 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||||| ||||| || || | || || || ||||||||||| || || | Sbjct 613468 TGTCGATCGTGTCGGAGGATTCTACCTCCAGTGTTATTGTCTTGCCCGTTAGGGTTTTCA 613527 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 613528 CGAAGATCTGCATCTT 613543 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || ||||| |||| ||| | || ||||||||| ||||| ||||| || Sbjct 1997430 CCGCCTCTCAACCGCAAAACCAGATGAAGCGTCGACTCCTTTTGGATATTATAATCTGCA 1997371 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | | || || ||||||||||| || || || | || |||||||| | || Sbjct 1997370 AGTGTCCTCCCATCTTCGAGCTGCTTACCTGCAAAGATCAAACGTTGCTGGTCTGGAGGA 1997311 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||||||| | ||| |||| | || | | | | |||||| ||| || Sbjct 1997310 ATACCTTCCTTGT-CTTGAATTTTCGCCTTCACATTGTCGATCGTGTCTGAACTTTCAAC 1997252 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| || || | ||||| ||||| || ||||| Sbjct 1997251 CTCCAGTGTAATGGTTTTTCCGGTCAAAGTCTTGACAAAAATCTGCAT 1997204 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || |||||||| || | ||| | || |||||| || ||||||||||| ||| Sbjct 1996974 CCTCCCCTCAAACGCAAAACAAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCTGCC 1996915 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | |||| | | || || || || || || || ||||| | || ||||||||| | || Sbjct 1996914 AAGGTCCTCCCATCTTCGAGTTGTTTGCCTGCAAATATCAATCTCTGCTGGTCTGGAGGA 1996855 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| | ||| |||| | |||| | | | ||||| ||| || Sbjct 1996854 ATTCCCTCCTTGT-CTTGAATTTTCGCCTTGACGTTATCAATGGTGTCTGAACTTTCAAC 1996796 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || |||||||| || || | ||||| || || || ||||| Sbjct 1996795 CTCCAATGTAATGGTTTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 1996748 Score = 82.4 bits (90), Expect = 9e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || ||||||| ||| | ||| | || ||||| || ||||||||||| || Sbjct 1996746 CCCCCCCTCAAACGCAGCACGAGATGAAGGGTAGATTCCTTCTGGATATTGTAATCTGCA 1996687 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || | | || || || ||||| ||||| ||||| | || ||||||||| | || Sbjct 1996686 AGGGTTCTGCCATCTTCCAGTTGCTTCCCAGCAAATATCAATCTCTGCTGGTCTGGAGGA 1996627 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | |||||| | | ||| |||||| |||| | | | ||||| ||| ||| Sbjct 1996626 ATTCCCTCCTTAT-CTTGAATTTTTGCCTTGACATTGTCAATGGTGTCTGAGCT---TTC 1996571 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || || || || || || || || || |||||||||||||| Sbjct 1996570 GACTTCAAGGGTAATTGTCTTTCCGGTGAGGGTTTTCACAAAGATTTGCAT 1996520 Score = 82.4 bits (90), Expect = 9e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || || |||||||| || | ||| | || |||||| || ||||||||||| ||| Sbjct 1997202 CCCCCCCTCAAACGCAAAACAAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCTGCC 1997143 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | |||| | | || || || || || || ||||| || | || ||||||||| | || Sbjct 1997142 AAGGTCCTCCCATCTTCGAGTTGTTTGCCTGCGAAGATCAATCTCTGCTGGTCTGGAGGA 1997083 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | |||||||| | ||| |||||| || | | | | ||||| ||| ||| Sbjct 1997082 ATTCCCTCCTTGT-CTTGAATTTTTGCCTTCACGTTATCGATGGTGTCTGAGCT---TTC 1997027 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || |||||||| || || | ||||| || || || ||||| Sbjct 1997026 AACCTCCAATGTAATGGTTTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 1996976 >seq1 Length=4921564 Score = 113 bits (124), Expect = 5e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || |||||||| || || || || |||| || ||||| || || ||||| Sbjct 4756938 CTCCTTCTGGATGTTGTAATCTGCGAGCGTGCGGCCGTCCTCGAGCTGTTTCCCGGCGAA 4756997 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||| | || | || ||||| ||| ||| || |||| | Sbjct 4756998 GATGAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACATT 4757057 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||||| || |||| |||||| || ||||||||||| ||||| || Sbjct 4757058 GTCGATGGTGTCGGAGGATTCAACCTCGAGCGTGATTGTCTTGCCCGTTAGGGTCTTGAC 4757117 Query 43172 AAAGATTTGCATTTT 43186 ||||| ||||| || Sbjct 4757118 GAAGATCTGCATCTT 4757132 >seq2135 Length=1067647 Score = 109 bits (120), Expect = 6e-19 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| || | |||||||||||||| || |||||||| || ||||| || | || || Sbjct 902486 CACCAAGTGAAGAGTGCTCTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCTTC 902427 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| ||||| || || | | ||||||||| | || | || |||||||||| | Sbjct 902426 AAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC-T 902368 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149 | | || | || | ||| | | | ||||| |||| || || || | ||||||| Sbjct 902367 GTATCTTAGCTTTAACGTTGTCAATGGTGTCGGAGCTC---TCGACCTCTAAGGTGATGG 902311 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || || ||||| ||||| || ||||| Sbjct 902310 TCTTTCCAGTGAGAGTCTTGACAAAAATCTGCAT 902277 Score = 107 bits (118), Expect = 2e-18 Identities = 167/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || || | || |||||| || | ||| |||||||||||||||||| || ||| Sbjct 902959 CCTCCCCTCAACCTCAGCACCAAGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGCC 902900 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| || | || || | |||||| || || || || || | ||||||||| | || Sbjct 902899 AAAGTGCGACCATCCTCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCCGGTGGG 902840 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | | ||||||| | ||| | || | ||||| ||| | | | |||||| |||| | Sbjct 902839 ATTCCTTCCTTGT-CTTGAATCTTGGCTTTGA-CGTTGTCAATCGTGTCGGAGCTC---T 902785 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || | |||||||| || || || || ||||| ||||| || ||||| Sbjct 902784 CCACCTCCAAGGTGATGGTCTTTCCAGTGAGAGTCTTGACAAAAATCTGCAT 902733 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | ||||| || | || |||||| ||||| ||||||||||| Sbjct 902047 CCACCTCTGAGACGGAGGACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAATCAGCA 901988 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| ||| |||| || || || || ||||| || || | | ||||||||| | || Sbjct 901987 AGAGTGCGCCCGTCTTCGAGTTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCCGGGGGA 901928 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | || |||||||||| || | || | || | ||| | | | |||||| ||| || Sbjct 901927 ATGCCCTCCTTGTCC-TGGATCTTGGCTTTAACGTTGTCAATCGTGTCAGAACTC---TC 901872 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| || || || || || ||||| ||||| || ||||| Sbjct 901871 GACTTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTGACAAATATCTGCAT 901821 Score = 96.9 bits (106), Expect = 4e-15 Identities = 166/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | ||||| || | || |||||||||||| |||||||| || Sbjct 901819 CCCCCTCTGAGACGGAGGACCAAGTGGAGGGTAGACTCCTTTTGAATGTTGTAATCGGCA 901760 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| ||| |||| || || || || ||||| || || | | |||||||| | || Sbjct 901759 AGAGTGCGCCCGTCTTCGAGTTGTTTGCCAGCAAAGATCAACCTTTGCTGGTCCGGAGGG 901700 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||||||||| ||| || || | ||| | | | ||||| ||| ||| Sbjct 901699 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGCT---TTC 901644 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189 ||| |||| |||||||| || || || || || || |||||||| ||||| | ||| Sbjct 901643 CACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTTTTCACAAAGATCTGCATCTGTAC 901587 >seq149 Length=2637241 Score = 104 bits (114), Expect = 3e-17 Identities = 142/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| ||||| || || | ||||| |||| || ||||| || || ||||| Sbjct 721951 TCCTTCTGAATGTTGTAGTCGGCTAAGGTCCGGCCGTCCTCCAGCTGTTTTCCGGCGAAG 721892 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| |||||||| || | ||| | | ||||||||| ||| || |||| | Sbjct 721891 ATGAGGCGCTGCTGATCCGGCGGGATACCTTCCTTGTCCTGGATCTTCGCCTTGACATTG 721832 Query 43113 GCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | |||||| ||| ||||| |||| ||||| ||||| || ||||| || || Sbjct 721831 TCGATGGTGTCGGAGCTC---TCCACTTCGAGAGTGATTGTTTTTCCGGTTAGGGTTTTC 721775 Query 43170 ACAAAGATTTGCATTTT 43186 || |||||||||||||| Sbjct 721774 ACGAAGATTTGCATTTT 721758 >seq2167 Length=1051226 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| || |||| ||||||||| | || |||||||||||| || ||||| || Sbjct 203759 TCCTCCTCTCAATCGCAGCACCAAATGAAGAGTCGACTCCTTTTGAATGTTATAATCGGC 203818 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || | | || || ||||||||||| || || || |||| |||||||| | || Sbjct 203819 AAGTGTTCTACCATCTTCGAGCTGCTTACCGGCAAAGATCAGTCTTTGCTGGTCTGGAGG 203878 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | || |||||| |||||| |||| | | | ||||| ||| || Sbjct 203879 GATACCTTCTTTGTCCTGGATTTTCGCCTTGACATTGTCGATTGTGTCTGAACTTTCAAC 203938 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || || || || | |||||||| || |||||||| Sbjct 203939 TTCCAAAGTGATTGTCTTTCCAGTCAATGTCTTTACGAAAATTTGCAT 203986 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || || |||||||||||||| || || || | || || || ||||| |||||||| Sbjct 204480 TCTTTCTGGATATTGTAATCAGCGAGGGTTCGACCATCTTCAAGTTGCTTTCCAGCGAAG 204539 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | || |||||||| | || | | |||||||| |||||| ||||| ||| Sbjct 204540 ATCAATCTTTGCTGGTCTGGAGGGATCCCTTCCTTGTCTTGGATTTTGGCTTTGA-CGTT 204598 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| ||| || || | ||||| |||||||| || || || ||||| Sbjct 204599 GTCGATTGTGTCTGAACTTTCAACCTCCAAAGTGATTGTTTTGCCGGTAAGAGTTTTTAC 204658 Query 43172 AAAGATTTGCAT 43183 ||| || ||||| Sbjct 204659 AAAAATCTGCAT 204670 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || ||||| ||||| || || || || |||| || ||||| || ||||| || Sbjct 203567 CTCCTTCTGGATATTATAATCGGCAAGCGTGCGTCCGTCTTCGAGCTGTTTCCCAGCAAA 203626 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | |||||||| | || | | ||||| || ||| | |||| || | | Sbjct 203627 GATGAGCCTTTGCTGGTCCGGTGGAATCCCTTCCTTATCT-TGAATCTTTGCTTTCACAT 203685 Query 43112 CGCC-ACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | || ||| ||| ||||| || | ||||| ||||||||||| | |||| Sbjct 203686 TGTCGATTGTATCGGAACTC---TCCACCTCCAAAGTGATCGTTTTGCCCGTCAAAGTCT 203742 Query 43168 TTACAAAGATTTGCATT 43184 | || |||||||||||| Sbjct 203743 TGACGAAGATTTGCATT 203759 Score = 84.2 bits (92), Expect = 3e-11 Identities = 140/196 (71%), Gaps = 10/196 (5%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || ||||| ||||||||||| || || || || | || || || || |||||||| || Sbjct 204936 TCTTTTTGGATATTGTAATCTGCGAGGGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAG 204995 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | | ||||||||| | || | | ||||| | | ||| |||| | ||||| ||| Sbjct 204996 ATTAACCTCTGCTGGTCCGGGGGAATTCCTTCCTTAT-CTTGAATTTTAGCTTTGA-CGT 205053 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||| || ||| || || |||| ||||| || ||||| || || |||| Sbjct 205054 TGTCGATCGTATCTGAACTC---TCGACCTCGAGAGTGATCGTCTTGCCGGTAAGAGTCT 205110 Query 43168 TTACAAAGATTTGCAT 43183 |||||||||| ||||| Sbjct 205111 TTACAAAGATCTGCAT 205126 >seq848 Length=4381129 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||||| || || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 3585495 AAAAATTATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 3585436 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 3585435 TCACCACTATACTAC 3585421 >seq2140 Length=1089051 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||||| || || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 848848 AAAAATTATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 848907 Query 60117 TCACCACTATACTAC 60131 | ||||||||||||| Sbjct 848908 TTACCACTATACTAC 848922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571801789243360