Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq848 93.3 9e-14 >seq848 Length=4381129 Score = 93.3 bits (102), Expect = 9e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841 || ||| ||| ||| || | || ||| || || ||||||||||||| |||||||||| Sbjct 3844493 CTTGACAGCGAGATAATATATGACAGAGACTTTGAATACGATTTCTTTGGTTTCAAAACG 3844434 Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901 || || | || || ||||| || | | || ||| | || ||| | |||||||||| Sbjct 3844433 CTCGAAAGGTCTTACCTCCTAAAGGTCCAAGGGAAGGTTGTTGAAAGGCCTCAGCACATG 3844374 Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGA 248942 || ||| |||| |||| || || ||||| ||||| || || Sbjct 3844373 TTAATGAGAGTTTCTGTTGGTATACACAAAGATGATATCGA 3844333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073735968118016