Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq582 95.1 9e-15 seq2167 84.2 2e-11 >seq582 Length=2128859 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || ||||| || ||||| |||||||||||||| | || | ||| Sbjct 290915 AGGACCAAGTGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 290856 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | |||||||| ||| |||| || ||||| || ||| ||| | ||||||||||| Sbjct 290855 TCGAGCTGTTTGCCGGCAAAGATGAGCCTTTGCTGGTCCGGGGGAATTCCTTCCTTATCC 290796 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| |||||| | | | ||||| | || |||| ||||||| | Sbjct 290795 TGGATTTTGGCCTTGACGTTGTCGATTGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTC 290736 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| | ||||| || || |||||||| Sbjct 290735 TTGCCGGTAAGGGTTTTCACGAAGATTTGCAT 290704 >seq2167 Length=1051226 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || |||||||| |||||||||||||| || |||| |||| ||| |||||| | ||| Sbjct 204240 TGGAGAGTTGATTCCTTTTGAATGTTGTAATCCGCCAATGTTCTACCATCTTCAAGTTGC 204299 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATC 18211 || || ||| |||| |||||||| || || Sbjct 204300 TTTCCGGCAAAGATCAGTCTTTGCTGGTC 204328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379333773359940