Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq149 113 3e-20 seq2135 98.7 8e-16 >seq149 Length=2637241 Score = 113 bits (124), Expect = 3e-20 Identities = 153/210 (73%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | ||||| |||| || || || |||| |||| ||||| ||||| || Sbjct 721951 TCCTTCTGAATGTTGTAGTCGGCTAAGGTCCGGCCGTCCTCCAGCTGTTTTCCGGCGAAG 721892 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 || | ||||| ||||| | ||| | |||||| || || |||| | | ||||| || Sbjct 721891 ATGAGGCGCTGCTGATCCGGCGGGATACCTTCCTTGTCCTGGATCTTCGCCTTGACATTG 721832 Query 43039 CCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | |||||| ||| ||| || || | || || |||||||||||||| |||||||| Sbjct 721831 TCGATGGTGTCGG-AGCTCTCCACTTCGAGAGTGATTGTTTTTCCGGTTAGGGTTTTCAC 721773 Query 43098 AAAAATTTGCATTTTC--TTAATTTTATTT 43125 || |||||||||||| || ||||| ||| Sbjct 721772 GAAGATTTGCATTTTCTTTTGATTTTTTTT 721743 >seq2135 Length=1067647 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | ||| || | |||||| || | |||||| |||||||| | |||||||||| Sbjct 902275 CCGCCCCTCAGCCTGAGCACCAAGTGAAGAGTGCTTTCCTTTTGGATGTTGTAATCGGCA 902216 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || ||||| || || || ||||||||||| | ||| ||||| | || Sbjct 902215 AGAGTACGACCATCCTCCAACTGCTTCCCTGCAAAAATCAACCTCTGCTGATCCGGGGGA 902156 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061 | ||||| || || ||| ||||||| | ||| |||||| ||| ||| || Sbjct 902155 ATCCCTTCCTTGTCTTGAATCTTGGCTTTGACGTTATCAATAGTGTCG-GAGCTCTCAAC 902097 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || || || ||||| || ||||| || ||||| Sbjct 902096 CTCCAAGGTAATGGTCTTCCCAGTGAGAGTCTTGACAAATATCTGCAT 902049 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | ||| || | |||||| || | ||||||||||||||| | |||||||| | Sbjct 902503 CCACCCCTCAGCCTGAGCACCAAGTGAAGAGTGCTCTCCTTTTGGATGTTGTAATCCGCA 902444 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || || | || ||||| ||||| ||||| | ||| || || | || Sbjct 902443 AGAGTGCGACCATCTTCAAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCCGGGGGA 902384 Query 43003 ACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGA 43060 | || || || || ||| ||| |||| || || ||| |||||| ||| ||||| Sbjct 902383 ATGCCCTCCTTGTC-CTGTATCTTAGCTTTAACGTTGTCAATGGTGTCG-GAGCTCTCGA 902326 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| || || || ||||| || ||||| || |||||||| ||||| Sbjct 902325 CCTCTAAGGTGATGGTCTTTCCAGTGAGAGTCTTGACAAAAATCTGCAT 902277 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | ||| || | ||||| || | ||||||||||||||| | |||||||||| Sbjct 902731 CCACCCCTCAGCCTGAGAACCAAGTGAAGAGTGCTCTCCTTTTGGATGTTGTAATCGGCA 902672 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || ||||| || || || ||||| |||| | ||||| || | || Sbjct 902671 AGAGTACGACCATCCTCCAACTGCTTCCCTGCAAAGATCAGCCTTTGTTGGTCCGGTGGG 902612 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGAC 43061 | ||||| || || ||| ||||||| | ||| |||||| ||| ||| || Sbjct 902611 ATTCCTTCCTTGTCTTGAATCTTGGCTTTGACATTATCAATAGTGTCG-GAGCTCTCAAC 902553 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || ||||| ||||| || |||||||| ||||| Sbjct 902552 CTCCAAGGTAATGGTCTTCCCGGTGAGAGTCTTGACAAAAATCTGCAT 902505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381359318752296