Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythranthe_20guttata_20[refseq_20GCF_5F000504015.1_202014-04-02] 2,212 sequences; 322,166,964 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq20 141 1e-28 >seq20 Length=956477 Score = 141 bits (156), Expect = 1e-28 Identities = 371/557 (67%), Gaps = 12/557 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||||| |||||||||||||| | |||||||| ||||| | ||| || |||||| || Sbjct 871296 ATTTGGGAGATGTACAAAAAGGCCGAAGCCTCCTTCTGGACCGCCGAGGAAGTCGATTTG 871237 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||| ||||||| | | ||||| || | | || || ||| | || || Sbjct 871236 TCCCAGGACCTCCGCCACTGGGAAACCCTATCCACCGACGAGAAGC---ATTTCATCAAA 871180 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| || |||||||||| |||| |||||| || |||||| || || || ||| Sbjct 871179 CACGTTCTGGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTGGAAAACCTAGCCGGACGC 871120 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATGAT 125257 ||| | ||| || || | || | || || || ||||| ||||| ||| || Sbjct 871119 TTCATGAAGGAGGTGCAGATCTCGGAAGCC-CGCGCCTTCTACGGTTTCCAGATCGCAAT 871061 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCA 125317 || ||| | ||||| || |||||| || | || ||||| ||| | | Sbjct 871060 CGAAAACATACACTCCGAGATGTACAGCCTCCTCCTCGAATCCTACATAAAGGATTC-CG 871002 Query 125318 ACGTAAACA-CATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTC 125376 ||| || | || |||||| ||||||||| || || || | | | ||||| Sbjct 871001 ACGAGAAGAACAGGCTCTTCCGCGCAATCGAGACCGTCCCCTGCGTGGAGAGGAAGGCCA 870942 Query 125377 AATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCAT 125436 | |||| | || |||||||| | || | ||| || |||||| | | | || | Sbjct 870941 ATTGGGCACTCCGCTGGATCGACGGCGGCGAGTGTTT---CGCCGAGCGGATAATCGCGT 870885 Query 125437 TCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TGCGGCCATCTTTTGGCTCAAG 125495 ||||| ||| || || || ||||| || || || || |||| |||| || ||||| ||| Sbjct 870884 TCGCCTGCGTGGAAGGGATATTCTTCTCCGGAAGCTTCTGCG-CCATATTCTGGCTGAAG 870826 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 |||||||| || ||||| || |||| | |||||||| ||||| || ||||| || Sbjct 870825 AAGCGCGGTCTGATGCCGGGGTTGACTTTCTCGAACGAGTTGATATCGCGTGACGAAGGT 870766 Query 125556 CTACACTGTGACTTTGC 125572 || ||||| || || || Sbjct 870765 CTGCACTGCGATTTCGC 870749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741038709713120